Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01684 |
Symbol | sdaA |
ID | 6306634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3207083 |
End bp | 3208489 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642640388 |
Product | L-serine ammonia-lyase |
Protein accession | YP_001914245 |
Protein GI | 188577316 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.737007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGCTCA CCTCTCCGGC ACGCATGGCT GTCAGCACGT TCGACCTGTT CAAGATCGGT ATCGGTCCGA GTTCCTCACA CACCGTGGGG CCGATGCGCG CCGCCGAGCG CTTCGTGCAT CGCTGGCTGC TCGATGCCGG GCGCCTGCAG GACGTGATGC GCCTGCGCGC CGAAGTGTTC GGCTCGCTGG CCCTGACCGG CCGCGGCCAT GGCACCGACA AGGCGGTGCT GCTGGGGCTG GAAGGCCACC GCCCGAACCT GATCGACCCG GACATCATCC CGGCCGTGCT GGAGCGCATC CGCACCAGCA AGCGCATCAG CTTGATGGGC CAGCACGAGA TCAGCTTCGA GGAAAAGCGC GACTTGCCGA TGAACAAGCG GCAGAAGCTG CCGTACCACA CCAACGGCAT GCGCTTCACC GCTTACGACG CCGATGAAGG CGTGATCGCC ACACGCGATT ACTACTCGGT GGGCGGCGGT TTCGTGGTCA ACCAGGACGA TGCTGCCGAC GATCGCATCG TGGCCGACGA AACGCCGCTG CCCTACCCGT TCTTCAGTGG CGACGAACTG CTGGCGCAAT GCGCGCGCAG CGGATTGAGC ATTGCCGCAC TGATATTCGA AAACGAAAAA AGTTGGCGCA GCGAAGACGA GATCCGTGCG GGCCTGCGCG AGGTATGGAA GGCAATGCAG TCCTGCGTGG AGCGCGGCAT CCGCCAAGAA GGCACCCTGC CTGGCAGCCT GAATGTCTCG CGGCGCGCAC CGGCGCTGTA CCGCGAGCTG TCCTCCAAGC CGGAAGCGGC CATGCGCGAC CCGTTGACGA CGCTGGACTG GGTCAACCTG TACGCACTCG CAGTCAATGA AGAAAACGCC GCCGGCGGCC GTGTCGTCAC CGCCCCGACC AATGGTGCGG CCGGCATCAT CCCGGCGGTG CTGCATTATT TCGATCGATT CTGTGCGGGC GCCTCCGAGC AACGCATCTT CGACTTCCTG CTGACTGCTG CTGCGATCGG CATCCTGTAC AAGGAAAACG CCTCGATTTC CGGCGCCGAG GTCGGCTGCC AGGGTGAGGT GGGCGTGGCC TGTTCGATGG CAGCTGGCGG CCTGGTTGCT GCGCTTGGCG GCAACCCGGG GCAGATCGAA AACGCGGCGG AAATCGGCAT GGAACATAAT CTGGGTCTGA CCTGCGACCC GATTGGCGGC CTGGTGCAAA TCCCATGCAT CGAACGCAAC GCGATGGGCG CAGTGAAAGC CATCAACGCC AGCCGCATGG CCATGCGTGG CGACGGCAAG CACAAGGTCT CGCTGGACAA GGTCATCAAG ACCATGCGCG ATACCGGCCG CGACATGCAG GACAAGTACA AGGAAACCAG CCGCGGCGGC CTGGCGGTGA ATGTCATCGA ATGCTGA
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Protein sequence | MTLTSPARMA VSTFDLFKIG IGPSSSHTVG PMRAAERFVH RWLLDAGRLQ DVMRLRAEVF GSLALTGRGH GTDKAVLLGL EGHRPNLIDP DIIPAVLERI RTSKRISLMG QHEISFEEKR DLPMNKRQKL PYHTNGMRFT AYDADEGVIA TRDYYSVGGG FVVNQDDAAD DRIVADETPL PYPFFSGDEL LAQCARSGLS IAALIFENEK SWRSEDEIRA GLREVWKAMQ SCVERGIRQE GTLPGSLNVS RRAPALYREL SSKPEAAMRD PLTTLDWVNL YALAVNEENA AGGRVVTAPT NGAAGIIPAV LHYFDRFCAG ASEQRIFDFL LTAAAIGILY KENASISGAE VGCQGEVGVA CSMAAGGLVA ALGGNPGQIE NAAEIGMEHN LGLTCDPIGG LVQIPCIERN AMGAVKAINA SRMAMRGDGK HKVSLDKVIK TMRDTGRDMQ DKYKETSRGG LAVNVIEC
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