| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01643 |
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| Symbol | |
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| ID | 6306673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3250401 |
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| End bp | 3251999 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642640426 |
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| Product | alpha-L-fucosidase |
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| Protein accession | YP_001914283 |
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| Protein GI | 188577354 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.20303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGCGC TGCCGGCGTT GCAGGTCCAT GCGGCGCAAT CGCCGACCGC CCCGACCGCC
ACCACGCTCA GCCCTGAAGT CATCGACCAG CAGTGGCTCG ATGCCACCGC TGCCTATGCG
CCCGAACGCG AGCGCCTGGT GCGCGAAGCC GAAGCCGGCG CACGCAAGGG CCCGTTCCGC
CCCGACTGGG CGGCACTGAA GGCATATCAA TCGCCGGCGT GGTACGACAA CGCCAAGTTC
GGCATCTTCA TCCACTGGGG CGTGTTCTCG GTGCCGGCAT TCGGCAGCGA GTGGTATTCG
CGCAACATGT ATCTGGAAGG TTCCAAGGAA TTCGCCCATC ACGTGGCCAC CTACGGCCCG
CAGGCGAGCT TCGGCTACAA GGATCTGATT CCCAAGTTCA CCGCGCCCAA GTTCGACCCG
AATGGCTGGG CCAAGCTGTT CCGCGCGTCC GGCGCGCGCT ATGTGGTGCC GGTGGCCGAG
CACCATGACG GCTTTGCGCT GTACGACTCC AAGTTGTCCG ACTGGACGGC GATGAAGATG
GGGCCCAAGC GCGACCTGCT GGGCGAATTG TCCAAGGCCA TTCGCGCGCA GGGGCTGCAT
TTCGGGTTGT CCTCGCACCG CGCCGAGCAC AACTGGTTCT TCGACGGCGG GCGCACATTC
GATTCGGACG TCAACGACCC GCGTTACGCC GCGCTGTATG GTCCGGCGCA GGTGCGTCTG
CCCGGCAAGG ACGATGCCGA TGTGGCCAAC GACTGGACGC CGGTCTCGCA GGCCTGGCTG
GACGATTGGC TGGCGCGCAC GACCGAGTTG ATCGATATCT ATCAACCGGA CCTGATCTAT
TTCGATTGGT GGATTGCGCA CCCCACGTTC CGTCGCAGCC TGCCGACGAT GCTGGCGTAT
TACTACAACC AGGGCGCGGC GCGGACCGAG GCCGATCGCG GCGTGGTGGT GAACTACAAG
CTCGGCGCAT TTCCCGAAGG TGCAGGCACG CTGGATATCG AGCGTGGCCA GCTCACCGGC
ATCCATCCCA CGCATTGGCA AACCGACACC TCGGTCAGCA ACGCCTCGTG GGGTTACATC
GAAAACGACA CCTACAAGTC GCCCACCTTC ATCATCCACA TGCTGGCCGA TGTGGTGGCC
AAGAACGGCA ACCTGATGCT CAACATCGGC CCGCGTGCGG ATGGCTCGAT CCCGGATACC
GAGCGCGGCA TCCTGCTGGC GATCGGCAAG TGGCTCAAGA CCAACGGCAG CGCGATCTAC
GACAGCAAGC CCTGGCGCGT CTACGGCGAA GGCCCCACCG AAGTGGTGGG CGGCACCTTC
CAGGACATCA AGACCAAACC CTACACGGCC GAGGATTTCC GCTTCACCTC GCGCGATGGC
GCGCTGTATG CAATCGAACT CGGTTGGCCG CGTCGTGGCG AAGCCGTGAT TCGCTCGCTC
AACACCGCCG ATGGCGTGCG CGCTGTGACC CTGCTGGCCA ACGGCAAGCA GATCCCGTTC
GAACAACGCG CCGACGGACT GCATCTGCGC CTGCCGGTCA AGCCGGTTGG CGAGAGCGCC
TACGTCTTCC GCATCGACCT TTCCTCTCCC ACTCCCTGA
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| Protein sequence | MLALPALQVH AAQSPTAPTA TTLSPEVIDQ QWLDATAAYA PERERLVREA EAGARKGPFR
PDWAALKAYQ SPAWYDNAKF GIFIHWGVFS VPAFGSEWYS RNMYLEGSKE FAHHVATYGP
QASFGYKDLI PKFTAPKFDP NGWAKLFRAS GARYVVPVAE HHDGFALYDS KLSDWTAMKM
GPKRDLLGEL SKAIRAQGLH FGLSSHRAEH NWFFDGGRTF DSDVNDPRYA ALYGPAQVRL
PGKDDADVAN DWTPVSQAWL DDWLARTTEL IDIYQPDLIY FDWWIAHPTF RRSLPTMLAY
YYNQGAARTE ADRGVVVNYK LGAFPEGAGT LDIERGQLTG IHPTHWQTDT SVSNASWGYI
ENDTYKSPTF IIHMLADVVA KNGNLMLNIG PRADGSIPDT ERGILLAIGK WLKTNGSAIY
DSKPWRVYGE GPTEVVGGTF QDIKTKPYTA EDFRFTSRDG ALYAIELGWP RRGEAVIRSL
NTADGVRAVT LLANGKQIPF EQRADGLHLR LPVKPVGESA YVFRIDLSSP TP
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