Gene PXO_01621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01621 
Symbol 
ID6306692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp3282009 
End bp3283061 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content65% 
IMG OID642640445 
ProductBNR/Asp-box repeat domain protein 
Protein accessionYP_001914302 
Protein GI188577373 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4692] Predicted neuraminidase (sialidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTGTAG GTGCTGCACA GGCGCAATCG CCTGCGTCGC CGCCCTCGCC GATCGTGCTC 
AGCGAGTTCA TCGCCGATCC GGCTCCTACG CCGCAAGCAC ACGCCTCCAC CTTGCTGGAA
ACGCGCGATG GTCGCCTGCT GGCCGCCTGG TTCGGCGGCG CGCATGAAGG CGCAGCCGAT
GTCGGCATCT GGCTCGCTCA GCGCGGCCCA CAGCAATGGC AGACACCACG CCATCTTGCC
GATGGCGCGC ACGCAGGCGT CGATGGCGCT GCAGTGCCGG CATGGAATCC GGTGTTGTTC
CAATCGGCCA CCGGGCCGTT GCAGCTGTAC TACAAGCTCG GACCCAATCC GCGCCAATGG
TGGGGGCTGC GTCTGCTCTC CACTGACGAC GGCGCGCACT GGTCGCCACC GCAGCGGCTG
CCCGACGGCA TTCTCGGGCC GATCAAGAAC AAACCGGTGC AGTTACCGAA CGGCCGCATC
CTGGCGCCAA GCAGCAGCGA AGATCGCGGA TGGCGCGCGC ACCTGGAATG GAGCGACGAC
GACGGCGCGC ACTGGCAGCG CGGCATGCCA CTCAACGATG CGAGCGTGAT CGGCGCGATC
CAGCCCAGCC TGCTGCTGTA TCCGGATGGA CGCCTGCAGG CGCTGGGCCG CAGCCAGCAG
AACAAACTCT TCAGCACGTT CTCCAACGAT GGCGGCCTGC ATTGGCAGCC CATGCACTTG
CTGGACGTGG AAAACCCCAA TTCCGGCACC GACGCGGTGA TGTTGCGCGA CGGCCGCGCC
CTATTGGTCT ACAACCCCGC AATTGCAGGC AAGGATTGGT GGGAGGGCCG CGGCACCCTG
GCAGTTGCCG TGTCCAACGA CGGCACGCAC TGGCAGCGCA TGCTGACGCT GGAAAACAGC
GAAAAAGACG AGTTTTCCTA TCCTGCGGTC ATCCAGACAC GCGATGGCCT GGTGCACATC
AGCTACACCT GGAAGCGTCA GCGCATCAAG CACGTGGTGC TCGATCCCAC GCGGATCAAC
GCATCCGCTG CTGCCAGTCG TCCGTCCCCG TAA
 
Protein sequence
MGVGAAQAQS PASPPSPIVL SEFIADPAPT PQAHASTLLE TRDGRLLAAW FGGAHEGAAD 
VGIWLAQRGP QQWQTPRHLA DGAHAGVDGA AVPAWNPVLF QSATGPLQLY YKLGPNPRQW
WGLRLLSTDD GAHWSPPQRL PDGILGPIKN KPVQLPNGRI LAPSSSEDRG WRAHLEWSDD
DGAHWQRGMP LNDASVIGAI QPSLLLYPDG RLQALGRSQQ NKLFSTFSND GGLHWQPMHL
LDVENPNSGT DAVMLRDGRA LLVYNPAIAG KDWWEGRGTL AVAVSNDGTH WQRMLTLENS
EKDEFSYPAV IQTRDGLVHI SYTWKRQRIK HVVLDPTRIN ASAAASRPSP