Gene PXO_01539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01539 
Symbol 
ID6306776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp3373404 
End bp3374054 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID642640527 
ProductISXo8 transposase 
Protein accessionYP_001914383 
Protein GI188577454 
COG category[L] Replication, recombination and repair 
COG ID[COG5659] FOG: Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0768502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGGTC TCCGCAGCAA CACGAAGGTC TGGTGGGGAT CGCACCAACC TGCGCCCATG 
CCGCCAGCCA GCCCTAAGGG CGGTCGGCCC CGCACACGAC CGATGCGCGA TAGCGCACAT 
GCGCCGATCT CGGTACATGA AGTCGCGCAG AGCTTGCCCG CAAGGACGTA TCGGCAGGTC 
AGCTGGCGCC AGGGCAGCGA CGCAACGCTC AGTTCGCGGT TCGCGGCGGT GCGGGTTCGT 
GCCGCACACA ATTGCCAGGC ACATGACGAG CAGTGGCTGC TGATCGAGTG GCCGCCGGGA 
GAGTCCGAGC CCCGCCACTA CTGGTTCTCG ACGCGACCAA AGCAAACGCC GGTCAAGACA 
CTGGTTGCCA CGGCACAAGG CCGATGGCGG ATTGAACGCG ATTATCAGGA GCTGAAGTCG 
GAGTTGGGCC TGCATCACTA TGAAGGGCGT AACTGGCGTG GTTTTCACCA TCACGCCAGT 
CTGTGCATCG CCGCATACGG GTTCTTGATG CGCGAGCGCC TGCGCAGTAA AAAAAACTCC 
GTCGCATTCA AGATGCCTGC AGTATCCAAA AGTGTCCGCC CGCGCGGGTC TGGCCCCAAT 
GCAACGTCAC CATCCCAACT CGATTGCCAC GCTGGCCTTC GGACTGGCTA G
 
Protein sequence
MVGLRSNTKV WWGSHQPAPM PPASPKGGRP RTRPMRDSAH APISVHEVAQ SLPARTYRQV 
SWRQGSDATL SSRFAAVRVR AAHNCQAHDE QWLLIEWPPG ESEPRHYWFS TRPKQTPVKT 
LVATAQGRWR IERDYQELKS ELGLHHYEGR NWRGFHHHAS LCIAAYGFLM RERLRSKKNS 
VAFKMPAVSK SVRPRGSGPN ATSPSQLDCH AGLRTG