Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01518 |
Symbol | |
ID | 6306797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3397820 |
End bp | 3398761 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642640547 |
Product | ribosomal large subunit pseudouridine synthase C |
Protein accession | YP_001914403 |
Protein GI | 188577474 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCATGC TCAAAGTTCC GGAAGACCGT GCTGGGCAGC GGCTGGATAA TTTCCTGCTT GGCCAGCTCA AGGGTGCGCC GCGCAGCCTG ATCTACAAAC TGGTCCGCAG CGGTCAGGTG CGGGTGAACG GCGGGCGGGC CAAGGCCGAG CGCAAGCTCG AAGGCGGCGA AGAAGTGCGG ATTCCGCCGG TACGCGTCAA CGAAGAGGGC GACAAAGCGG CGCCGCCGTC CTCGTTCATG GCGCGGCTGG AAGCGGCGAT CGTGTTCGAA GACGCGCGCC TGCTCGCCTT GAACAAGCCG TCCGGGGTCG CCAGCCATGG CGGCAGCGGG ATCAGCTTCG GTGCCATCGA AACGCTGCGC GCGCTGCGGC CGAACCAGAA CCTGGAACTG GTGCACCGGC TCGACCGCGA TACATCCGGT CTATTGATCG TGGCCAAGAA GCGCTCGGCG CTGACCGAGC TGCAGGCCTT GATGCGCGAA GACGACCGCG TCGAAGGGCG GGGCATCACC AAGCGCTACC TGAGCTTATT AATAGGACGC ATGCCCGATG GCGTGATGAG CGTGGACGCG CCGCTGCATA TCGGCCTGCG CCAGGGGGGC GAGCGGCATG TGCAGGTGAA TGCGATTGGC AAGCCGTCGC TGAGCCATTT CACGTTGCTG GAACGGCGCG GTGGGCATTC GTATTGCGAA GTGCGCATCG AAACCGGTCG CACCCACCAG ATCCGCGTGC ATGCCCAGCA CCTGGGTCAC CCGGTGGCCG GCGACGACAA ATACGGCGAG GCGGACGTGA ACAAGCGCCT GCGTGACCAA CTCGGTTTGA AGCGGCTGTT CCTGCATGCC GCGTCGCTGG AGTTCGCCCT GGATGCCGGC CAGACGCCGT ACGTGCTGAG CGCGCCGCTG GCGCCCGAAC TGGCCGAAGC GCTGGACCAG CTTGGCCGCT GA
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Protein sequence | MRMLKVPEDR AGQRLDNFLL GQLKGAPRSL IYKLVRSGQV RVNGGRAKAE RKLEGGEEVR IPPVRVNEEG DKAAPPSSFM ARLEAAIVFE DARLLALNKP SGVASHGGSG ISFGAIETLR ALRPNQNLEL VHRLDRDTSG LLIVAKKRSA LTELQALMRE DDRVEGRGIT KRYLSLLIGR MPDGVMSVDA PLHIGLRQGG ERHVQVNAIG KPSLSHFTLL ERRGGHSYCE VRIETGRTHQ IRVHAQHLGH PVAGDDKYGE ADVNKRLRDQ LGLKRLFLHA ASLEFALDAG QTPYVLSAPL APELAEALDQ LGR
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