| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01501 |
|---|
| Symbol | |
|---|
| ID | 6306817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 3416744 |
|---|
| End bp | 3417739 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642640567 |
|---|
| Product | ISXoo6 transposase |
|---|
| Protein accession | YP_001914422 |
|---|
| Protein GI | 188577493 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.543852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGA CGATGCAACT GACCTTCGGA GACGCGGAGT ACAACGGCAA GCGCAAGCGG
ACGCGGCGTG AGGTGTTTTT GGCCGAGATG GATCAGGTCG TGCCATGGAA GGGCCTGCTG
GCGCTGATCG AGCCGCACTG TCCAAAGTCG GGGCAGCCGG GGCGACAGCC GTATCGGCTG
GAGACGATGC TGCGCATCCA CTTTTTGCAG CAGTGGTATG CGCTGAGCGA TCCCTCGGCG
GAAGAAGCGC TGTACGACAC GGTGTCGATG CGCCGCTTCG CGAAGATCGG CGGGCTGGAC
GAGGTGCCGG ATGAAACGAC GATTCTCCAC TTCCGGCATC TGCTGGAGCG GCATGATCTG
GCGCGCAAGC TGTTCAACCG GGTCAACGCG CACCTGTCGC GTAAAGGGCA GAGTCTGCGG
GGCGGGACGA TCGTGGATAC CACGATCATT GCGGCGCCCA GTTCGACCAA GAACAAGCAG
GGCGAGCGCG ATCCGGACAT GCACCAGACC AAGAAGGGGA ATCAATATGA CTTCGGGATG
AAGGCGCACA TCGGGGTGGA CGATGACTCC GGGCTGGTGC ACCACGTCGA ATGCACGGCG
GCCAACGTGG CCGATATCAC GCAAGCGCAC AAGCTGCTGC ACGGCAAGGA AGACACGGTG
TGCGGGGACA GCGGCTACAC CGGGCTTGAG AAGCGCGAGG AAATGAAGCG CAAGCGCACG
CTGCGCTACC TGATCGCCGA GAAACCCTCG AAGCTGAAGC AGATCAAGAA CAAACGCGAA
CTGAAGTTGG CCAAGCGCTG GGAGCACACC AAGGCCAGCC TGCGGGCGAA GGTGGAACAC
CCGTTCCGGG TGATCAAGCG TCAGTTTGGT TACGTCAAGG TGCGCTATCG CGGCCTGGTC
AAGAACACCG CGCAGATGCT AACGCTGTTT GCGTTGTCGA ATCTGTGGCT GAAGCGCAAA
GAGTTAATGC CCGCTGCGGG GAAGGTGTGC CTGTAA
|
|---|
| Protein sequence | MTTTMQLTFG DAEYNGKRKR TRREVFLAEM DQVVPWKGLL ALIEPHCPKS GQPGRQPYRL
ETMLRIHFLQ QWYALSDPSA EEALYDTVSM RRFAKIGGLD EVPDETTILH FRHLLERHDL
ARKLFNRVNA HLSRKGQSLR GGTIVDTTII AAPSSTKNKQ GERDPDMHQT KKGNQYDFGM
KAHIGVDDDS GLVHHVECTA ANVADITQAH KLLHGKEDTV CGDSGYTGLE KREEMKRKRT
LRYLIAEKPS KLKQIKNKRE LKLAKRWEHT KASLRAKVEH PFRVIKRQFG YVKVRYRGLV
KNTAQMLTLF ALSNLWLKRK ELMPAAGKVC L
|
|---|
| |