| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01458 |
|---|
| Symbol | |
|---|
| ID | 6306856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3446725 |
|---|
| End bp | 3450984 |
|---|
| Gene Length | 4260 bp |
|---|
| Protein Length | 1419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642640604 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001914459 |
|---|
| Protein GI | 188577530 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.523698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGGCT GGTCACTTGC GGTCGCACAG GAAGCGCCGG TCGCCCAGCC CAACGCGATG
ATCGGCGAGC CGCTGTTCCG TGGCCTGGAC CACCCGATAC CCGACAGCGC GGTGCCGTTT
GCGCCGGGCG GGCAACTGGC ACGGATCTAC GCTGCCGATG TTGCGCATGG CGCAGGTCAG
GCGCCGGGCA ATGATTTCTG GATCGACCGC ATGCTGGCGC GCGAGGGAAC CGGCGGTGGC
TTCGACGATC GCAACGACTG GCTGTTTACC CGTGGTCGCG CTGCGTATCT GACGTATCAC
GCGCCTGATG CGCCGGGATT CGTCGGGCAG GTGGCGTATT GGCATTCCAC CGATTACGAC
GCGTTGTTCC ACATCTACAC CACGCTGGGC AAGCGTCATG TTCAATGGAA GGAGCGTTCG
CTGCAGCGGC GGCAGACACC GAGTTATTTC ACGACGGTGT TCGAAGATGC CGGCGCAGGC
GTGCGCATGC GGCTGGTCAA GTACATCACC GAACAGAACG TGGCGGTGGC CAGTGTCGTG
CTGTCCAGTC TGGATGGCGG GGCGCACACG GTATCCCTAC AAGCAGTCTC CCCGATTGCC
CAGCATGCCG ATGGCAAGGA GCTGACCGGC GCATTCGACG CCTACAACCA CATCACGACG
GTATTTCCGC GTTTATCCGG CGATGGATTC CATGTCGAGG GGCAACGCCT GGTTCGCGAG
GTGGACATTC CCGCCAGCGG CGAAACCGCG GCAATCAAGT TGCAGCTTGG CATGCTGACC
CGCGAGTTAC CCGAAGCGCG CGCCGAGTAC ACGCGCATTG CCTCGCAAAC GCCGCAGCAG
GCCTACCAGC AGCATGTGGC CAGCTACAAC CACTGGTGGG TGGACAACCT GCCGTACCTG
GACACGCCTG ACGAGAACAT CAGCAAGAGC CTGTTCTACC GTTGGTGGGT ACTGCGCTTC
AACTTTCTCG ATGCCAACGT CCCCGGCAAC GACTATCAGT TTCCGGTCGC CATCGAGGGC
GTGCTCGGCT ACGACAATGC CATCGTGCTG ACGGCCGGGA TGTTCCTGGA CGATCTGAAG
TACCTGCGCA ATCCGCTGTA CGCCTATGGC ACCTGGCTCA GCGCGGGCGA AACCGCGGGC
GGCGGCAAGT ACACCGACAA CCCGGGCTCG CCGGAGAACT GGTCCAATTC CTACGCGCAA
TACATCACGG CCGCCGCATG GCGGTCGATG CAGATCCACG GCGGGCCGGC GGCGCTGGTG
GGCAAGTTGG CACGCTATGG CAGCGGTGAC GTGGATGGTG TGTTGGCCGC CTACGATCTC
AATCACAACG GCTTGATCGA ATACGACTGG GCAGCGATGA CCGGTAACGA CGCCGATGCG
GTGTCGTTCG ATTGGGCCGC TCAACACGGC CAGATCCGCA TGGACCGCAC CGAGAGCGCC
TATGTCTATG CCAATGCGCA GGCGGCAGCG CAGGCCGCGG TGCTCGCAGG CGATACCGCC
ACTGCGCAGC GCATGCAGGC CACCGCGCGC CGCATCCGCA AGGCCACGCT TGAGGTGTTA
TGGCAGGATC ACAGCGACAC GCCCGATTCG GTCGGGCTCT ATGGCGATCT GCTCAAGCAT
CGCCAGGCCG ACGGTCCGCG GCTAGCGGTC GATTGGAAGG AAACCAACAA CTACTATCCC
TTCAGCGTGG GCTTGATGCC CAAGCACGGC GATAGCGACT ACGACCCCAA GTATGTGCGC
GCATTGCGGC TGTTCGCCGA CGCAGCGCAA TACCCGTTGT TTCCGTTCTA CACCGCCAAC
CAGGTGGACA TGCAGGCGCG CGGCAGCGGC ACCGATGTGG GCAGCAATAA TTTTTCCACC
ATCAATGCAA CCGTGGCGTT TCGCCTGTTG GGCTCGGCCT TGCGCGATTA TCCCAGCCCA
TATTTGAACG CGCAGAGCTA TCGCAAATTG CTGTACTGGA ACGCGTGGGC GCCCTTTATC
AATGGCGACA ACCGCTATCC GGACCAGAAC GAATTCTGGG CCAAGGGCAG TGCCAGGAAC
GGCGGCAAGA TCGGCTACCG CTCGTGGATC CACCATACCC AGCTGGGCGC GACCAACTTC
ACCATGATCG AGGATGCGAT GGGCTTTCGC CCGCGCAGCG ACGGCAAGAT CGAGCTGTAT
CCGATCGATA TCGGCTGGGA TCATTTCGCC GCTGACAATC TGCGCTATCG CGACCGCAAT
CTGAGCATCG CCTGGGATCG CGATGGCAGC CACTACGGCG GACGGATCCC CAAGGGCTAT
AGCGTCTATC TGGATGGCCG CTTGGCGTTT CGCGTGGATC GGCTGGCACA CGTGATCTAC
GACCCGGCCA GCGGGCAGGT GAGCCCAGCG CCGGATGCGG TCAATCGCAA TGGTGCCGCG
CAAGTGCTCC AAGCCCATCC TGCTGCAGTG GCCTCGATGA CGCAGGTGTC GTTCGCCGCC
GGCACGCGGA TCGCGCAGAT CCTGGCCAAG GCCGGTGTGG ATGTGACCCT GCCACCAGCG
CGTAGCCGCA ACCTGGCGCA GGGCGCGCGT GTCAGCGCCA GTTTTGCTGC TGCTGGTTTG
CCAGCAACGG CTGCGGTGGA CGGCAGTACC GCCAGTACGC CGTTCTGGGG CACCGCAGGC
TCGCCGTCCG CCAGCGACTG GATCGCACTG GACCTGGGCG GCATGCGGAC GCTGGATCAG
GTGGTGCTGT ACTTCTATCG CAGCTCCTCG CCGGGCGGCG ATCAGAACGG CTTTCCGTCC
GGAACGCAGC CTGGCTACGC AGCACCGTGG GTCTACGCCG TGCAATATCA GGACGGCAGC
GGGGCGTGGA AGACCATCCC CGGGCAGGTG CGCGATGCCA CGATGGCTGA AGGCAATCGC
AATCGGGTGC GCTTTCCCGC AATCCAGACC GCAGCGCTAC GCGTGGTGGT GACCCATGCC
GGCACGGCGC GCACGGGCAT CAAGGAAATC CAGGTGTTCG ACAGCGGCTT GCCGGCGCCG
GCGTTCGCGG GCAACACGCC GCCGCAGGTG CAGGCGTGGC AGTTGGACAC TCTCGGTGCC
GATGGTGCGG TGGTGGTGCA GGCACGCGTC GGCGATGACG GCTTGCCCAA TGGCTCGCTG
CAGGTGCACT GGCGTGTGCA GCAGGCACCG GAAGGCGGCG ATGCGGTGTT TGCCGATGCC
GCTGCGCTGC AGACGTCGGT GCGTTTCACC CGTGCCGGGC AGTACACTTT GCGTCTGGTT
GCAAACGACG GGGCGCTGAT GGGGCATGCC GACGTGCAGG TCAACGCCCC GGCCTCTCGC
CCGCTACAGA GCATCCCGTT GCAGGCCATG GCCAGTGTCA GTGCGCAACT CACAGGCATG
CAGTACCGCG TGCAGGCCTT GAACGATGGG TTTATCCCAA AGGCAGGCAG TTTTCCCAGT
GGCAGCCTGC GCTGGGGCAG TTACGGGCTC GACCAGCCGG CAACAGTGTG GTTGCAGTAT
CAGTGGCCAC GACCTGTGCG GCTGTCGTCC AGTGCGCTCT ATCTGTGGAA CGACCAGCCC
AACGGTGGGG TGGCCGCGCC TGCCAGCTGG AAGTTGCAGA TGCTGCAGGA CGGACGTTGG
CAGGACATCG TCAGCAAGAG CGGGTACCCG ATTGCCGCGG CGGCAACCGG CGCCGCAAGC
ACCGCCAGCT TTGCGCCGGT GGTGACCAAC GGACTGCGCG TGGTGTTAAC GACTCAGACC
ACGTCCGACG GGCACGCCGC CATTGGCGTA GACGAATGGC AGGCACTGTC TGAGCTGCCC
AAGCAGATGG AGGCGATCGA TCTGCGCACT GCTCCCGGGC AGACGCCGTC GCTGCCACAG
GAGATCACCG CATTCTTTGC CGATGGCAGC GTGCTGCCGG TGGCGGTGCA GTGGTCCGAT
CTGGCCGCCA GCCGCCTGGG CCACGAAGGG GCGGTGGAAC TGCAAGGCTT GGTGGAAGGC
GCGATTCCCG TCAAGGCCAC CATCTGGGTA CGCGCAACGC CGCCCGGGCA GATCAATACC
GTGCAGCCAT TGCCGACGGT GACTGCGGTG GTCGGGCATG CACCGACGCT ACCGGGTTTT
GTCACGGTGC AATACAACGA CGGTTCGCGT GAACGCTTGC CGGTGCAATG GCCCACGCTG
GAAGCCGCGC GCTACGCACA GCCTGGCGAG ATCCAGCTCA CCGGCACTGC GCAAGGGCGT
GCACCCGCCG GGAAAGTCTC GGTGCCGCTG GTATTGCAGA TCCAGGCGGC TGCACCATGA
|
|---|
| Protein sequence | MLGWSLAVAQ EAPVAQPNAM IGEPLFRGLD HPIPDSAVPF APGGQLARIY AADVAHGAGQ
APGNDFWIDR MLAREGTGGG FDDRNDWLFT RGRAAYLTYH APDAPGFVGQ VAYWHSTDYD
ALFHIYTTLG KRHVQWKERS LQRRQTPSYF TTVFEDAGAG VRMRLVKYIT EQNVAVASVV
LSSLDGGAHT VSLQAVSPIA QHADGKELTG AFDAYNHITT VFPRLSGDGF HVEGQRLVRE
VDIPASGETA AIKLQLGMLT RELPEARAEY TRIASQTPQQ AYQQHVASYN HWWVDNLPYL
DTPDENISKS LFYRWWVLRF NFLDANVPGN DYQFPVAIEG VLGYDNAIVL TAGMFLDDLK
YLRNPLYAYG TWLSAGETAG GGKYTDNPGS PENWSNSYAQ YITAAAWRSM QIHGGPAALV
GKLARYGSGD VDGVLAAYDL NHNGLIEYDW AAMTGNDADA VSFDWAAQHG QIRMDRTESA
YVYANAQAAA QAAVLAGDTA TAQRMQATAR RIRKATLEVL WQDHSDTPDS VGLYGDLLKH
RQADGPRLAV DWKETNNYYP FSVGLMPKHG DSDYDPKYVR ALRLFADAAQ YPLFPFYTAN
QVDMQARGSG TDVGSNNFST INATVAFRLL GSALRDYPSP YLNAQSYRKL LYWNAWAPFI
NGDNRYPDQN EFWAKGSARN GGKIGYRSWI HHTQLGATNF TMIEDAMGFR PRSDGKIELY
PIDIGWDHFA ADNLRYRDRN LSIAWDRDGS HYGGRIPKGY SVYLDGRLAF RVDRLAHVIY
DPASGQVSPA PDAVNRNGAA QVLQAHPAAV ASMTQVSFAA GTRIAQILAK AGVDVTLPPA
RSRNLAQGAR VSASFAAAGL PATAAVDGST ASTPFWGTAG SPSASDWIAL DLGGMRTLDQ
VVLYFYRSSS PGGDQNGFPS GTQPGYAAPW VYAVQYQDGS GAWKTIPGQV RDATMAEGNR
NRVRFPAIQT AALRVVVTHA GTARTGIKEI QVFDSGLPAP AFAGNTPPQV QAWQLDTLGA
DGAVVVQARV GDDGLPNGSL QVHWRVQQAP EGGDAVFADA AALQTSVRFT RAGQYTLRLV
ANDGALMGHA DVQVNAPASR PLQSIPLQAM ASVSAQLTGM QYRVQALNDG FIPKAGSFPS
GSLRWGSYGL DQPATVWLQY QWPRPVRLSS SALYLWNDQP NGGVAAPASW KLQMLQDGRW
QDIVSKSGYP IAAAATGAAS TASFAPVVTN GLRVVLTTQT TSDGHAAIGV DEWQALSELP
KQMEAIDLRT APGQTPSLPQ EITAFFADGS VLPVAVQWSD LAASRLGHEG AVELQGLVEG
AIPVKATIWV RATPPGQINT VQPLPTVTAV VGHAPTLPGF VTVQYNDGSR ERLPVQWPTL
EAARYAQPGE IQLTGTAQGR APAGKVSVPL VLQIQAAAP
|
|---|
| |