Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01423 |
Symbol | |
ID | 6306887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3484155 |
End bp | 3484934 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642640635 |
Product | transposase |
Protein accession | YP_001914490 |
Protein GI | 188577561 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGGCT TCATCTGCGT TTTCGGTGTG CTGGAATTGC CAGTGTTCGT TACGCTACGT CCTGGTTTCT GGCAGTTTTC GCCCATGCGG ACACGCCGTC CTGCTGCCGA GCAGTTGCCT GCCGATGAGC TGTGTCGTTC GCGCCTGGAG AACCAGATCG ACGTGCGCAA TCCGCTGGTC CAGCTGAGCC ATCGGCTGCC GTGGAGTGCG TTGGAGCAGG CGCTGTCGCA ACGGTTGCCG GCCACCACCG GCACAGGCGG TCGGCCCGCA TTGCCGGTGC GGTTGATCGC CGGGTTGCTT TACCTCAAGC ACGCCTACGA CCTGTCCGAC GAGGCGGTCT GCGAGCGCTG GCTGGAAAAT CCGTACTGGC AGTTCTTCAC CGGCGAGGTG GTGTTCCAGA CCTGCGTGCC GTGCGATCCC AGCTCCCTGA CCCGTTGGCG ACAGCGCCTG GGCGAAGCCG GGATGGAAGC GCTGTTGGCG CACACGATCA ACACCGCTCA CACGATGAAG GCGGTGGATG CGCGCGAGTT GTCGCGGGTG ATCGTGGATA CCACCGTGCA GGAAAAAGCG ATCGCCCATC CCACCGACAG CCGTTTGCTG GAGGTGGCGC GCAAGAAGCT GGTGCTGCTG GCCAAGCGCC ACGGCATCGT CTTGCGGCAG ACCTATGTGA GGCAAGGTCC GGGGTTGAGC CGCAAGGCCG GGCGCCATGC GCATGCGCGC CAGTTCAAGC GCATGCGCAA GGTACTGCGA CGCCAACGCA CGATCCTGGG ACGCGTATGA
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Protein sequence | MQGFICVFGV LELPVFVTLR PGFWQFSPMR TRRPAAEQLP ADELCRSRLE NQIDVRNPLV QLSHRLPWSA LEQALSQRLP ATTGTGGRPA LPVRLIAGLL YLKHAYDLSD EAVCERWLEN PYWQFFTGEV VFQTCVPCDP SSLTRWRQRL GEAGMEALLA HTINTAHTMK AVDARELSRV IVDTTVQEKA IAHPTDSRLL EVARKKLVLL AKRHGIVLRQ TYVRQGPGLS RKAGRHAHAR QFKRMRKVLR RQRTILGRV
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