| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01391 |
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| Symbol | gumB |
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| ID | 6306919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3513993 |
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| End bp | 3514691 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642640666 |
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| Product | exopolysaccharide xanthan biosynthesis export protein GumB |
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| Protein accession | YP_001914520 |
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| Protein GI | 188577591 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.300976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC TGATCGGACG ATTTTGCCAA GCGCTGAGCC TGGCCTTGAT CTGCTCGATG
ACACTGGGCG CTTGCAGCAC CGGGAAAGAC ATGGCGACGT CGTTGCCGCT TCCCGATCCG
CTCGCAATGT CTGCGGTGCA ACCCGAGTAT CGACTCTCTC CAGGCGATCT GCTGCTGTTC
AAGGTGTTCC AGATCGACGA TCTGGAACGA CAGGTACGTA TCGATCAGAA CGGCCATATT
TCGTTGCCGC TTATCGGCGA TGTCAACGCA GCTGGCATGA GCGTTGGTGA GCTGGAGAAA
ATGGTGGCCG ACCGGTATCG CAACGGCTAT TTGCAAAATC CGCAGGTGTC GGTGTTCGTG
CAGGAATCCA ACGGTCGCCG CGTCACCGTG ACCGGCGCGG TGACAGAGCC CGGCATCTAT
CCGGTCGTCG GCGCCAATCT GACCCTCCAG CAGGCCGTGG CGCAGGCGAA GGGCGTCAGC
ACCGTGGCCA GCCGCGGCAA TGTCATCGTG TTCCGCATGG TCAATGGGCA AAAGATGATT
GCGCGGTTCG ACCTGGCCGA GATTGAGAAG GGCACCAATC CGGATCCTGA GATTTACGGC
GGCGATATCG TCGTTGTGTA CCGCTCGGAT GCGCGCGTTT GGTTGCGCAC CATGCTGGAA
ATGACTCCTC TTGTGATGGT GTGGCGCGCA TACCGATGA
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| Protein sequence | MKKLIGRFCQ ALSLALICSM TLGACSTGKD MATSLPLPDP LAMSAVQPEY RLSPGDLLLF
KVFQIDDLER QVRIDQNGHI SLPLIGDVNA AGMSVGELEK MVADRYRNGY LQNPQVSVFV
QESNGRRVTV TGAVTEPGIY PVVGANLTLQ QAVAQAKGVS TVASRGNVIV FRMVNGQKMI
ARFDLAEIEK GTNPDPEIYG GDIVVVYRSD ARVWLRTMLE MTPLVMVWRA YR
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