Gene PXO_01390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01390 
Symbol 
ID6306921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp3515300 
End bp3515656 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content61% 
IMG OID642640668 
Producttranscription regulator protein 
Protein accessionYP_001914521 
Protein GI188577592 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.249906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGATC CGGGCAGTAA TCGCGAGCTA CCGCCGATTC CGGCCAAGCG CTACTTCACC 
ATCGGTGAGG TAAGCGAGCT ATGCGACGTC AAACCGCATG TGCTGCGCTA CTGGGAAACC
GAATTCCCCA GCCTGGAGCC GGTCAAACGG CGCGGCAACC GGCGCTACTA CCAGCGCCAC
GATGTGCTGA TGGTGCGTCA GATCCGCGGG CTGTTGTACG AGCAGGGCTA CACCATCGGC
GGTGCGCGCT TGCGTCTGGA AGGCGATGGT GCCAAAAGCG AGTCGGCGCT GAGCAATCAG
ATCATCAAGC AAGTGCGGAT GGAGCTGGAA GAAGTCCTGC AACTGCTGCG CCGCTAG
 
Protein sequence
MLDPGSNREL PPIPAKRYFT IGEVSELCDV KPHVLRYWET EFPSLEPVKR RGNRRYYQRH 
DVLMVRQIRG LLYEQGYTIG GARLRLEGDG AKSESALSNQ IIKQVRMELE EVLQLLRR