| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01302 |
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| Symbol | nusA |
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| ID | 6307012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3598499 |
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| End bp | 3599986 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642640759 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001914610 |
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| Protein GI | 188577681 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.30262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATGCGG TCGCCAATGA AAAAGGCGTG CCGCGTGAAG TGATCTTCGA TGCGATCGAG
GCCGCGCTGG CTTCCGCAGC GAAGAAGCGC TACCCCGACC AGGACGTGCT GGCCCGCGTC
ACCATCGATC ACAAGGACGG TACCTACGAA ACCTACCGTC GTTGGGAAGT GGTTGCCGAT
GACGTGGTGA TGGAATCCCC GGACCGCCAG GTGCGTCTGA TGGATGCCAT CGACGAAGCC
GACGGCGTGG ATGTGGGCGA CTACATCGAA GAACAGATCG AAAACCCAGA CTTCGGTCGT
ATCGCCGCGC AGGCTGCCAA GCAGGTGATC GTGCAGCGTG TGCGCGAAGC CGAGCGTCAG
CAGGTGGTCG ATGCGTGGAA GGATCGCGTC GGTGAGTTGA TCACCGGTGT GGTCAAGCGC
GCCGAGCGCG GCAATATCTT TGTCGATCTG GGCGGCAATG CCGAAGCCTT CATTCCGAAG
GACAAGGGCA TTCCGCGCGA CGTGTTGCGT CCCGGCGACC GCGTCCGCGG TTATCTGGCC
GAAGTGCGTT CCGAGCCGCG TGGCCCGCAG CTGTTCATCA GCCGCGCCGC GCCGGAATTC
ATGATCGAAC TGTTCAAGCT TGAAGTGCCG GAAGTGGGCC AGGGCCTGGT CGAGATCAAT
GCCTGCGCAC GCGATCCGGG CGACCGCGCC AAGATCGCCG TGATCGCGCA CGACGCCCGC
ACCGATCCGA TCGGCGCGTG CATCGGTATG CGTGGTTCGC GCGTCCAGGC GGTCTCCAAC
GAGCTCAATG GCGAGCGCGT GGACATCGTG TTGTGGAACG AGAATCCGGC CAACTTCGTC
ATCAACGCGA TGGCGCCGGC CGAAGTGCAG TCGATCATCG TCGATGAAGA CAAGCACTCG
ATGGACCTGG CCGTGGCAGA AGACCGCCTG GCGCAGGCGA TCGGCAAGGG CGGCCAGAAC
GTGCGTCTGG CCAGCCGCCT GACCGGCTGG CAGCTCAACG TGATGACCGC TGATCAGGTG
GCCGCCAAGT CCGAGGCCGA GCAGGCAGCG GCACGCCAGC TGTTCATGGA TCGCCTGGAA
GTGGACGAAG AAATCTCCGC GATCCTGGTG TCCGAAGGCT TCAACACGGT CGAAGAAATC
GCCTACGTGC CGGTTGGCGA GTTGCTGGCG GTCGAAGGCT TCGACGAAGA CATCGTCGAA
GAATTGCGCG CCCGTGCCCG CGATGCGCTG CTCAACGCCG CGCTGGCAGA AGAAGAAGGC
CTGGAAGGAA CTCAGCCCAC CGAGGACCTG CTGGCGCTGG AGGGGATGGA CGAGGAGACG
GCAGTTGCGC TGGCCGAGCA CGGCGTGCGC ACCAGCGAGG ACTTGTCCGA CCTGGCTGCG
GACGAGATCG TCGACTTCGG CATCGAGGGT TTGACCCAGG AGCGCGCCGC GGCGCTGATC
CTGGCGGCCC GCGCCGAGGA GATCGCCCGT TTGGAGCGCG GCGAATGA
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| Protein sequence | MDAVANEKGV PREVIFDAIE AALASAAKKR YPDQDVLARV TIDHKDGTYE TYRRWEVVAD
DVVMESPDRQ VRLMDAIDEA DGVDVGDYIE EQIENPDFGR IAAQAAKQVI VQRVREAERQ
QVVDAWKDRV GELITGVVKR AERGNIFVDL GGNAEAFIPK DKGIPRDVLR PGDRVRGYLA
EVRSEPRGPQ LFISRAAPEF MIELFKLEVP EVGQGLVEIN ACARDPGDRA KIAVIAHDAR
TDPIGACIGM RGSRVQAVSN ELNGERVDIV LWNENPANFV INAMAPAEVQ SIIVDEDKHS
MDLAVAEDRL AQAIGKGGQN VRLASRLTGW QLNVMTADQV AAKSEAEQAA ARQLFMDRLE
VDEEISAILV SEGFNTVEEI AYVPVGELLA VEGFDEDIVE ELRARARDAL LNAALAEEEG
LEGTQPTEDL LALEGMDEET AVALAEHGVR TSEDLSDLAA DEIVDFGIEG LTQERAAALI
LAARAEEIAR LERGE
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