Gene PXO_01288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01288 
Symbol 
ID6307027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp3615002 
End bp3615550 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID642640774 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_001914624 
Protein GI188577695 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.26871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTCAGA CCCTGGATCG TCTGATGACC AACCCGATGC CTGAAGGCCG GGTGGAAGAC 
ATCCTGCGCC CGGAAGGCGA AAACCCGCTG CTCGAAAAGG GCTACGTGAC CACCAGCGTC 
GATGCGCTGC TGAATTGGGC GCGCACCGGC TCGATGTGGC CGATGACGTT CGGTTTGGCC 
TGTTGCGCCG TCGAGATGAT GCATGCGGGC GCCTCGCGCC TGGACCTGGA CCGCTATGGC 
GTGGTGTTCC GCCCGTCGCC GCGCCAGTCC GACGTGATGA TCGTGGCCGG TACCCTGGTC 
AACAAGATGG CTCCGGCGCT GCGCAAGGTC TACGATCAGA TGCCGGATCC GAAGTGGGTC 
ATTTCGATGG GCAGCTGCGC CAATGGCGGC GGCTATTACC ATTATTCCTA TTCGGTGGTA 
CGCGGTTGCG ACCGCATCGT GCCGGTGGAC ATCTACGTCC CGGGCTGCCC GCCGACCGCC 
GAGGCGCTGG TCTACGGCAT CTTGCAGCTG CAGAAGAAGA TCTGGCGTAC CCAGACGATC 
GCGCGCTGA
 
Protein sequence
MIQTLDRLMT NPMPEGRVED ILRPEGENPL LEKGYVTTSV DALLNWARTG SMWPMTFGLA 
CCAVEMMHAG ASRLDLDRYG VVFRPSPRQS DVMIVAGTLV NKMAPALRKV YDQMPDPKWV 
ISMGSCANGG GYYHYSYSVV RGCDRIVPVD IYVPGCPPTA EALVYGILQL QKKIWRTQTI 
AR