| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01285 |
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| Symbol | tpiA |
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| ID | 6307031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3616635 |
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| End bp | 3617390 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642640778 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001914627 |
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| Protein GI | 188577698 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.300976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGAA AGATCGTTGC CGGAAATTGG AAGCTGCATG GCAGCCGCGC CTTCGCCACC
GAACTGGTGG CCAAGCTCGC CGCGCACATG CCCCTGGAGG GTATCGACGT CGTCATCCTG
CCGCCACTGC CTTACCTCGG CGACCTGATC GAGGATTTCG AGGCCCATCA CCTGTCGTTC
GGAGCCCAGG ACGTCAGCAG CAATGAGAAG GGCGCCTACA CTGGCGAGGT CTCGGCCTCG
ATGTTGGTGG ATGTCGGTGC CGGCTACGGG CTGGTCGGCC ACTCCGAGCG CCGTCAGTAC
CATCAGGAGA GTAGCGAGCT GGTGGCGCGC AAGTTCGCCG CCGCGATCCA TGCCGGGCTG
ACTCCGGTGC TGTGCGTGGG CGAATCGCTG GAACAGCGTG AAGCCGGTCA GACTGAGGCA
ATCCTACGTG CCCAGCTCGA ACCGGTCCTG GCGCTGGTCG GCAGTGCCGG TTTCGCGGGC
GCCGTGCTGG CCTATGAACC GATCTGGGCC ATTGGCACCG GCTGTACCGC CACGCCGGAG
CAGGCCCAGG CCGTGCACGC CTTCCTGCGT GGCGAAGTCG CGAAGGCGGA TGCTAGAATC
GCTGATTCGT TGCCCATCCT GTACGGGGGC AGTGTCAAGC CCGATAACGC CGGCGAGCTG
TTTGCACAGC CCGATGTCGA TGGCGGGCTG GTCGGAGGCG CTTCACTGGT CGCCGAAGAT
TTCCTGGCCA TCGCACGCGC GGCGGCCGCG TGCTAA
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| Protein sequence | MRRKIVAGNW KLHGSRAFAT ELVAKLAAHM PLEGIDVVIL PPLPYLGDLI EDFEAHHLSF
GAQDVSSNEK GAYTGEVSAS MLVDVGAGYG LVGHSERRQY HQESSELVAR KFAAAIHAGL
TPVLCVGESL EQREAGQTEA ILRAQLEPVL ALVGSAGFAG AVLAYEPIWA IGTGCTATPE
QAQAVHAFLR GEVAKADARI ADSLPILYGG SVKPDNAGEL FAQPDVDGGL VGGASLVAED
FLAIARAAAA C
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