Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01227 |
Symbol | |
ID | 6306382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2951790 |
End bp | 2952617 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642640138 |
Product | hypothetical protein |
Protein accession | YP_001913995 |
Protein GI | 188577066 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0374911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGTCGA AATCCTTGAA CTCCCATGCC GAGGCGTCCG TCAACGCGCA GGCACGTGGT GGCGTGCATG TGCAGATGAC AGGCCGAATG GTCTCGACCG CAATGGCGCT CGCTCTGTGC CTGGCTAACG GCCACGCCAT CGCACAGGCA GACGATGCAC CGGCATTCGA CCGCCCGGGT ATTCCGTTCT CCACGGAAGT AGTGCAGCCA GGCGCCTTCG CCTGGGAACA GGGCCTGCCG GATGCGAGTA CCGATCGCAG TGATGGGCAG CGAACCACTG AATACACCGC CGATACGCTG CTGCGCCTGG GGCTGTTCCA GAACGTCGAG CTGCAGCTGG GGAGCGACAG CTATCGCTGG CAGCATGTCG GCGGCGCGCG GGTGCGTGGC GGTGGCGACA GCAGCGTCGG ATTAAAGGTG GCCTTGCCGT CGCGCTCGGA CAGTTTTCAT TGGGCTGCGC TGGGCACCTA TAGCGTGCCG ACCGGCAGCC CGGCCTTCAG CGACGGCTAT GCGCGCGAAC TCGGTGTGAC CGCGTCCTGG GACCTACCGC AGCAGCGCGC CATCGCGGTG TACGTCAATT ACGCGCGCGA CGATGGTGGG AACACCTGGA CCTTCGCGCC CAATTACACG TTTTTCTCCG GTGATCGTTT CAGCAGCTAC GTGGAAGCGG GTTTCGACAC CGGCAGTGAG CATTCGCGCG TGGCCGGTGC GGGCGGCGCC TGGCGGCTGC CGCATGCGAT GCAGCTGGAC GTGTCGGTAT TGCGTGGCCT GACCTCGGAG AGCCCGGATT GGCAGGGCGG CATCGGGCTG TCGATCGCGT TCGAGTGA
|
Protein sequence | MSSKSLNSHA EASVNAQARG GVHVQMTGRM VSTAMALALC LANGHAIAQA DDAPAFDRPG IPFSTEVVQP GAFAWEQGLP DASTDRSDGQ RTTEYTADTL LRLGLFQNVE LQLGSDSYRW QHVGGARVRG GGDSSVGLKV ALPSRSDSFH WAALGTYSVP TGSPAFSDGY ARELGVTASW DLPQQRAIAV YVNYARDDGG NTWTFAPNYT FFSGDRFSSY VEAGFDTGSE HSRVAGAGGA WRLPHAMQLD VSVLRGLTSE SPDWQGGIGL SIAFE
|
| |