Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01185 |
Symbol | dnaK |
ID | 6306424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2990850 |
End bp | 2992775 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642640180 |
Product | molecular chaperone DnaK |
Protein accession | YP_001914037 |
Protein GI | 188577108 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0550021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGA TCATTGGTAT TGACCTCGGC ACCACGAACT CGTGCGTGTC GATCATGGAC GGCGGCAAGG CCCGCGTCAT CGAAAACTCC GAGGGCGATC GCACCACGCC CTCGATCGTC GCCTACACCA AGGACGGCGA AGTGCTGGTA GGCGCCTCGG CCAAGCGCCA GGCGGTGACC AACCCGAAGA ACACCTTCTA CGCGGTGAAG CGCCTGATCG GCCGCAAGTT CACCGACGCC GAAGTGCAGA AGGACATCTC GCACGTGCCG TACGGCATCC TGGCGCACGA CAACGGCGAC GCCTGGGTGC AGACCAGCGA TGCCAAGCGC ATGGCGCCGC AGGAAATCTC CGCACGCGTG CTGGAGAAAA TGAAGAAGAC CGCGGAAGAC TACCTCGGCG AGAAGGTCAC CGAAGCGGTG ATCACGGTGC CGGCGTACTT CAACGACAGC CAGCGTCAGG CCACCAAGGA CGCTGGCCGC ATCGCCGGTC TGGACGTCAA GCGCATCATC AACGAGCCGA CCGCCGCAGC ACTGGCTTAT GGCCTGGACA AGAAGGGCGG CGACCGCAAG ATTGCGGTGT ACGACCTGGG CGGCGGCACC TTCGACGTGT CGATCATCGA GATCGCTGAA GTCGATGGCG AAAAGCAGTT CGAAGTGCTG GCTACCAACG GCGATACCTT CCTGGGCGGC GAAGACTTCG ACAACCGCGT CATCGAGTAC CTGGTCGATG AGTTCAACAA GGACCAGGGC ATCGACCTGC GCAAGGATCC GCTCGCGTTG CAGCGCCTGA AGGACGCCGC AGAGCGCGCC AAGATCGAGC TGTCGTCCAG CCAGCAGACC GAAGTCAATC TGCCGTACGT CACCGCCGAT GCGTCGGGCC CGAAGCACCT CAACATCAAG TTGACCCGTG CCAAGCTCGA AGCGCTGGTG GAAGACCTGG TCAAGAAGTC GATCGAGCCG TGCCGCACCG CGTTGAACGA CGCCGGCCTC CGCGCCAGCG ACATCAACGA AGTGATCCTG GTCGGCGGTC AGACCCGCAT GCCGAAGGTG CAGCAGGCGG TTGCCGATTT CTTCGGCAAG GAACCGCGCA AGGATGTCAA CCCGGACGAA GCCGTGGCCG TGGGTGCTGC GATTCAGGGC GGCGTGCTGG CCGGCGACGT CAAGGACGTG CTGCTGCTGG ACGTGACCCC GCTGTCGCTG GGTATCGAAA CCATGGGCGG CGTGTTCACC AAGATCATCG AAAAGAACAC CACCATCCCG ACCAAGGCTT CGCAGACCTT CTCCACCGCC GAAGACAACC AGTCGGCCGT GACCGTGCAC GTGTTGCAGG GTGAGCGCGA GCAGGCCCGC TTCAACAAGT CGCTGGCCAA GTTCGACCTG TCCGGCATCG AGCCGGCCCC GCGTGGCATG CCGCAGGTGG AAGTGTCCTT CGACATCGAC GCCAACGGCA TCCTGCACGT GTCGGCCAAG GACAAGAAGA CCAACAAGGA ACAGAAGGTC GAGATCAAGG CCGGTTCGGG TCTGTCGGAT GAAGAGATCC AGCGTATGGT CGCCGACGCG GAAGCCAACC GCGAAGAAGA CAAGAAGTTC CATGAGCTGG TGCAGGCACG CAACCAGGCC GATGGCCTGA TCCATGCCAC CCGCACCGCG ATCACCGAGC ATGGCAGCAA GGTCGGTGGC GATGTGATCG GCAAGGTGGA AGCGGCGCTG TCGGATCTGG AGACCGCCAT GAAGGGCGAC GACAAGGCGC AGATCGAAGC ACGCACCAAG ACGTTGGAAG AAGCCGGCCA GTCGCTGTAC GCCGCAGCTG CGGCAGCAGA GCAGGGCGGC AGCGCCGATG CCGCCAGCGG TAACGCGCAG GCGTCCAAGG CCGCCGATGA CGTGGTGGAC GCCGAGTTCA CCGAAGTCAA GGACGACAAG AAGTAA
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Protein sequence | MGKIIGIDLG TTNSCVSIMD GGKARVIENS EGDRTTPSIV AYTKDGEVLV GASAKRQAVT NPKNTFYAVK RLIGRKFTDA EVQKDISHVP YGILAHDNGD AWVQTSDAKR MAPQEISARV LEKMKKTAED YLGEKVTEAV ITVPAYFNDS QRQATKDAGR IAGLDVKRII NEPTAAALAY GLDKKGGDRK IAVYDLGGGT FDVSIIEIAE VDGEKQFEVL ATNGDTFLGG EDFDNRVIEY LVDEFNKDQG IDLRKDPLAL QRLKDAAERA KIELSSSQQT EVNLPYVTAD ASGPKHLNIK LTRAKLEALV EDLVKKSIEP CRTALNDAGL RASDINEVIL VGGQTRMPKV QQAVADFFGK EPRKDVNPDE AVAVGAAIQG GVLAGDVKDV LLLDVTPLSL GIETMGGVFT KIIEKNTTIP TKASQTFSTA EDNQSAVTVH VLQGEREQAR FNKSLAKFDL SGIEPAPRGM PQVEVSFDID ANGILHVSAK DKKTNKEQKV EIKAGSGLSD EEIQRMVADA EANREEDKKF HELVQARNQA DGLIHATRTA ITEHGSKVGG DVIGKVEAAL SDLETAMKGD DKAQIEARTK TLEEAGQSLY AAAAAAEQGG SADAASGNAQ ASKAADDVVD AEFTEVKDDK K
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