Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01090 |
Symbol | |
ID | 6306127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2679714 |
End bp | 2681189 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639890 |
Product | ISXoo5 transposase |
Protein accession | YP_001913750 |
Protein GI | 188576821 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCACA CCCAGAACGC CGACTTCTTC CGGCAGCCCT TGGCCGAGAT GATCGATCCG CGCCACCCGC TGGCGGTGCT GGCCCGTCGG CTGCCCCGGG CGCAGATCGA GGCGGTGTTG GCCCCGCATT TCGCTCGCAA GGTGCGCGCA GGTCGCGCGG TGGCGCAACA CGATCTGTTC GGCCCCTCGG TGCAAGTGGC CGGTGCCGGT ATTGCCGCTT CCGGCCGCCC ACGCCTTCCC ATTCGCTTGA TGGCCAGCCT GTTGGACCTG AAGCACGCTT ACAAGCTCAG CGACGAGGAA CTGGTGGAGC GCTGGGCCCA GAACGTGGTC TGGCAGCACT TCAGCGGCAT GGCGTTCTAT GAGCCGCGCC TGCCCTGCGA TGCCACGCAG GTCGGGCGTT TTCGCGCGGC CATCGGTGAG GCCGGGGTCG AGGAACTGCT CAAGGCCACC ATCGACACCG CGGTGTCCTC CAAGGCCATC GTGCCCGCCG AGTTCGAACG GCTGATCGTG GACACCACCG TGCAGGAGAA GGCCATTGCT CATCCGGTGG ATTGGCGCCT GATGGAGAAC GCGCGGCACA AGCTGGTGGC GGCGGCCAAG CGCGCGGGCA TCGCGCTCAA GCAGACCTTC GCCAAAGAAA CCAAGACGCT GCGGCGCAAA GCCGGCGGCT ACGCCCATGC CAGGCAGTTC AAGCGCCTGC GCAAGGTCCT CAAACGCCAG CGCACGATCC TGGGCATCGT ACTGCGCGAG GTGCAGCGCA AGATCAGGCA AGCCAGCCAG GCCACGGCGC CGGCGCTGGA GAATCTGCAC ACGCTGATGC AGCGCGCCGA GCGCATCCAT GCTCAGCAAC CCAATGGCAA GAACAAACTC TATGCCCTGC ACGCGCCCGA AGTGGAGTGC ATCGGCAAGG GCAAGGCGCG CAAGCCCTAC GAGTTCGGGG TGAAGGTCAG CGTGGCAATC ACGCACAAAC AGGGCCTGAT GGTCGGAGCG CGCAGCTTCA CCTGCCCCCC CTATGACGGC CACACGTTGC ACGAGCAACT GGAGCAGGCC CGGATCCTGA GCGAGGACAC AGCAGGCGCA CCTAAACAGG TGGTGGTGGA CCTGGGCTTT CGCGGTGTGG ATGCGGCCAA TCCCGGCGTT AAGATCATCC ACCGGGGCAA GTTCAAACGC CTGACAGATG AGCAGCGCCG CTGGCTGAAG CGACGCCAGG CGGTGGAGCC GGCCATCGGA CACTTGAAGC ACGACAACGG CATGGATCGG TGCTGGTTGC AAGGAGCGAA CGGCGATGCG CTGCACGCAG TGCTGTGCGC GGCGGGGGAC AACATCCGCC GGTTGCTGCG GGCCATGGTG CGTCTGGGAC TGAAGGGTCT TTTTGCGCCT ATGTTTGCGA GACTCATCAT GCTGGCCACA GTGCTCGCAA TGTCATTGCG AGCGAGGAAC ACACGCCCAC ATCGGTTGGC TTGGTGTGTT TGGTGA
|
Protein sequence | MAHTQNADFF RQPLAEMIDP RHPLAVLARR LPRAQIEAVL APHFARKVRA GRAVAQHDLF GPSVQVAGAG IAASGRPRLP IRLMASLLDL KHAYKLSDEE LVERWAQNVV WQHFSGMAFY EPRLPCDATQ VGRFRAAIGE AGVEELLKAT IDTAVSSKAI VPAEFERLIV DTTVQEKAIA HPVDWRLMEN ARHKLVAAAK RAGIALKQTF AKETKTLRRK AGGYAHARQF KRLRKVLKRQ RTILGIVLRE VQRKIRQASQ ATAPALENLH TLMQRAERIH AQQPNGKNKL YALHAPEVEC IGKGKARKPY EFGVKVSVAI THKQGLMVGA RSFTCPPYDG HTLHEQLEQA RILSEDTAGA PKQVVVDLGF RGVDAANPGV KIIHRGKFKR LTDEQRRWLK RRQAVEPAIG HLKHDNGMDR CWLQGANGDA LHAVLCAAGD NIRRLLRAMV RLGLKGLFAP MFARLIMLAT VLAMSLRARN TRPHRLAWCV W
|
| |