Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01085 |
Symbol | talC7b |
ID | 6306136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2688137 |
End bp | 2691088 |
Gene Length | 2952 bp |
Protein Length | 983 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642639899 |
Product | TAL effector AvrBs3/PthA |
Protein accession | YP_001913759 |
Protein GI | 188576830 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000275966 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCAG TGGAGGCAGT GCATGCATGG CGCAATGCAC TGACGGGTGC CCCCCTGAAC CTGACCCCGG ACCAAGTGGT GGCCATCGCC AGCAATATTG GCGGCAACCA GGCGCTGGAG ACGGTACAGC GGCTGTTGCC GGTGCTGTGC CAGGCCCATG GCCTGACCCC GGACCAGGTC GTGGCCATCG CCAGCCATGG CGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TGGTGGCCAT CGCCAGCAAT AGTGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA GGTGGTGGCC ATCGCCAGCC ATGGCGGCGG CAAGCAGGCG CTGGAGACGC TGCAACGGCT GTTGCCGGTG CTGTGCCAGG ACCATGGCCT GACCCCGGAC CAGGTGGTGG CCATCGCCAG CCATGGCGGC GGCAAGCAGG CGCTGGAGAC GCTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGCCCATGGC CTGACCCCGG CCCAAGTGGT GGCCCTCGCC AGCCACGATG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAGGTG GTGGCCATCG CCAGCAATAG TGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TCGTGGCCAT CGCCAGCAAT GGCGGCGGCA AGCAGGCGCT GGAGACGGTG CAACGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA TGTGGTGGCC ATCGCCAGCC ACGATGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG ACCATGGCCT GACCCCGGAC CAGGTCGTGG CCATCGCCAA CAATAACGGC GGCAAGCAGG CGCTGGAGAC GGTGCAACGG CTGTTGCCGG TGCTGTGCCA GGCCCATGGC CTGACCCCGG ACCAGGTCGT GGCCATCGCC AGCAATGGCG GCGGCAAGCA GGCGCTGGAG ACGGTGCAAC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGCCCAGGTG GTGGCCATCG CCAGCCATGG CGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGCCCA TGGCCTGACC CCGGACCAGG TCGTGGCCAT CGCCAGCAAT GGCGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA GGTGGTGGCC ATCGCCAGCC ACGATGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG ACCATGGCCT GACCCCGGAC CAGGTGGTGG CCATCGCCAG CCATGGCGGC GGCAAGCAGG CGCTGGAGAC AGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGACCATGGC CTGACCCCGG ACCAGGTGGT GGCCATCGCC AGCCACGATG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAGGTC GTGGCCATCG CCAGCCACGA TGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CTGGACCAGG TGGTGGCCAT CGCCAGCAAT ATTGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGCCCA GGTGGTGGCC ATCGCCAACA ATAACGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG ACCATGGCCT GACCCCGGAC CAGGTGGTGG CCATCGCCAG CAATGGCGGC GGCAAGCAGG CGCTGGAGAG CATTGTTGCC CAGTTATCTT GCCCTGATCC GGCGTTGGCC GCGTTGACCA ACGACCACCT CGTCGCCTTG GCCTGCCTCG GCGGACGTCC TGCCCTGGAT GCAGTGAAAA AGGGATTGCC GCACGCGCCG GAATTGATCA GAAGAATCAA TCGCCGCATT CCCGAACGCA CGTCCCATCG CGTTGCCGAC CTCCCCGAAC GCACGTCCAA TCGCGTTGCC GACCTCGCGC AAGTGGTGCG CGTGCTTGGT TTTTTCCAGA GCCACTCCCA CCCAGCGCAA GCATTCGATG ACGCCATGAC GCAGTTCGGG ATGAGCAGGC ACGGGTTGGT ACAGCTCTTT CGCAGAGTGG GCGTCACCGA ACTCGAAGCC CGCTGCGGAA CACTCCCCCC AGCCTCGCAG CGTTGGGACC GTATCCTCCA GGCATCAGGG ATGAAAAGGG CCAAGCCGTC CCCTACTTCA GCTCAAACGC CGGATCAGGC GTCTTTGCAT GCATTCGCCG ATTCGCTGGA GCGTGACCTT GATGCGCCCA GCCCAATGCA CGAGGGAGAT CAGACGCGGG CAAGCAGCCG TAAACGGTCC CGATTGGATC GTGCTGTCAC CGGCCCCTCC ACACAGCAAT CTTTCGAGGT GCGCGTTCCC GAACAGCGCG ATGCGCTGCA TTTGCCCCTC AGCTGGAGGG TAAAACGCCC GCGTACCAGG ATCGGGGGCG GCCTCCCGGA TCCTGGTACG CCCATCGCTG CCGACCTGGC AGCGTCCAGC ACCGTGATGT GGGAACAAGA TGCGGCCCCC TTCGCAGGGG CAGCGGATGA TTTCCCGGCA TTCAACGAAG AGGAGCTCGC ATGGTTGATG GAGCTATTGC CTCAGTCAGG CTCAGTCGGA GGGACGATCT GA
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Protein sequence | MTAVEAVHAW RNALTGAPLN LTPDQVVAIA SNIGGNQALE TVQRLLPVLC QAHGLTPDQV VAIASHGGGK QALETVQRLL PVLCQDHGLT PDQVVAIASN SGGKQALETV QRLLPVLCQD HGLTPDQVVA IASHGGGKQA LETLQRLLPV LCQDHGLTPD QVVAIASHGG GKQALETLQR LLPVLCQAHG LTPAQVVALA SHDGGKQALE TVQRLLPVLC QDHGLTPDQV VAIASNSGGK QALETVQRLL PVLCQDHGLT PDQVVAIASN GGGKQALETV QRLLPVLCQD HGLTPDHVVA IASHDGGKQA LETVQRLLPV LCQDHGLTPD QVVAIANNNG GKQALETVQR LLPVLCQAHG LTPDQVVAIA SNGGGKQALE TVQRLLPVLC QDHGLTPAQV VAIASHGGGK QALETVQRLL PVLCQAHGLT PDQVVAIASN GGGKQALETV QRLLPVLCQD HGLTPDQVVA IASHDGGKQA LETVQRLLPV LCQDHGLTPD QVVAIASHGG GKQALETVQR LLPVLCQDHG LTPDQVVAIA SHDGGKQALE TVQRLLPVLC QDHGLTPDQV VAIASHDGGK QALETVQRLL PVLCQDHGLT LDQVVAIASN IGGKQALETV QRLLPVLCQD HGLTPAQVVA IANNNGGKQA LETVQRLLPV LCQDHGLTPD QVVAIASNGG GKQALESIVA QLSCPDPALA ALTNDHLVAL ACLGGRPALD AVKKGLPHAP ELIRRINRRI PERTSHRVAD LPERTSNRVA DLAQVVRVLG FFQSHSHPAQ AFDDAMTQFG MSRHGLVQLF RRVGVTELEA RCGTLPPASQ RWDRILQASG MKRAKPSPTS AQTPDQASLH AFADSLERDL DAPSPMHEGD QTRASSRKRS RLDRAVTGPS TQQSFEVRVP EQRDALHLPL SWRVKRPRTR IGGGLPDPGT PIAADLAASS TVMWEQDAAP FAGAADDFPA FNEEELAWLM ELLPQSGSVG GTI
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