Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01060 |
Symbol | |
ID | 6306126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2673939 |
End bp | 2677868 |
Gene Length | 3930 bp |
Protein Length | 1309 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642639889 |
Product | glutamate synthase domain 2 |
Protein accession | YP_001913749 |
Protein GI | 188576820 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTTGC TGCGTCCTTC CAGCGCACCT GCCACCTGGA AACTGGCAGT AGAGAAAGCG ACGTCTCTGT CGGCCAATGG CTCGACGATT TCGCAGACAC TTACCGGCAG TGCGCAAAGC AAACGCATTT CCTTCGTTGC TACTGCGGGG CAGAACTTAG GCCTGGCGCT GAGCGATCTG GTGACACCCA ACAGTACAGG AGGGGTCTAT CTGACGATCT ATGACCCGGA CGGTATTTAC GTCGCATATC AATATTGCTA TGCCAGCAAC AACGGTTGCC AGGCTAACTT CGTGAACGCC AGGGCGGGGA CCTACAGCGT CGTCATCAAT GCGCCTTACG GTGGCGATCA AACGATGAGC TTCAAGAGCA CCTTGTCCAC CGACGTGACA GGGACGCTGA AAGCGGACAC TGCGCAGACG TTGACGCTGG GTCGGCGCGG ACAGAACGGA AGGCTGGCCT TTGCCGGCAC GGCTGGGCAA ACGGTCGCAT TGCAGGTCGC CGGCCAAACG ACAGTTCCAT CGAGCCGGAT GACGTATTAC ACCGTCTACG CACCGGATGG CTCGACACTG GGTTCGACCA CTGCGACGTC GGCAGCGACA TTAAACCTGC CCAATTTGCC GGCAACCGGT ACCTATACGG TATTTGTCGA TCCGTCCAAT GGGGAAACGC TCAGCGCACA GCTGACATTG GCTACCGGTA CTGCTGGCGG CCAGACGACC AACGGCGCCA GCGGCAGCTA TGCAACGACG GTTCCGGGCC AAAATGTCTA TCTGACGTTC AAGGCGGCAG CCGGTCAGAA CGTGGGCCTT GCGCTGAGCG ATTTGGTAAC GCCGAACAGC ACGAACTACG TCTATCTGAC GGTCTACAAG CCCGATGGCA GCTATGCGGC CAGTCAGTAT TGCTACGCCA GCAACAATGG TTGCCAGACC AACCTCGGCA ACACGATGGC AGGCACTTAT AGTGTCGTGG TCAATGCGCC TTACGACGGC GACCAGACAA TGAGCTTCAA GGCCACTGTG TCCAGCGACG TGACAGGGAC GCTACAGGCT GACACGGCGC AGACCTTGAC CCTGGGACGG CGTGGCCAGA ATGGGCGATT GAGCTTCGCC GGCACGGCCG GGCAAACGCT GGCAGTGCAG GTCGCCGGCC AGACGACTGT TCCATCGGGT CGAACGACGT ACTACACGGT ATACGCACCG GACGGCACGG CGCTGGCCTC TAGCGGCACG ACGTCGGCGA CAACCTTGAA TCTATCGAAC TTGCCGGCAA CCGGCACGTA TACGGTATTT GTCGATCCGT CCAATGGGGA AACGCTCAGC GCACAGCTAA CATTGGCTAC CGGTACTGCT GGCGGCCAGA CGACCAACGG CGCCAGCGGC AGCTATGCAA CGACGGTTCC GGGCCAAAAT GTCTATCTGA CGTTCAAGGC GGCAGCCGGT CAGAACCTGG GCCTGGGGCT GAGCGATTTG GTAACGCCGA ACAGCACGAA CTACGTCTAT CTGACGGTCT ACAAGCCCGA TGGCAGCTAT GCGGCCAGTC AGTATTGCTA CGCCAGCAAC AATGGTTGCC AGACCAACCT CGGCAACACG ATGGCAGGCA CTTATAGTGT CGTGGTCAAT GCGCCTTACG ACGGCGACCA GACAATGAGC TTCAAGGCCA CTGTGTCCAG CGACGTGACA GGGACGCTAC AGGCTGACAC GGCGCAGACC TTGACCCTGG GACGGCGTGG CCAGAATGGG CGATTGAGCT TCGCCGGCAC GGCCGGGCAA ACGCTGGCAG TGCAGGTCGC CGGCCAGACG ACTGTTCCAT CGGGTCGAAC GACGTACTAC ACGGTATACG CACCGGACGG CACGGCGCTG GCCTCTAGCG GCACGACGTC GGCGACAACC TTGAATCTAT CGAACTTGCC GGCAACCGGC ACTTATACGG TATTTGTCGA TCCGTCCAAT GGGGAAACGC TCAGCGCACA GCTAACATTG GCTACCGGTA CTGCTGGCGG CCAGACGACC AACGGCGCCA GCGGCAGCTA TGCAACGACG GTTCCGGGCC AAAATGTCTA TCTGACGTTC AAGGCGGCAG CCGGTCAGAA CCTGGGCCTG GGGCTGAGCG ATTTGGTAAC GCCGAACAGC ACGAACTACG TCTATCTGAC GGTCTACAAG CCCGATGGCA GCTATGCGGC CAGTCAGTAT TGCTACGCCA GCAACAATGG TTGCCAGACC AACCTCGGCA ACACGATGGC AGGCACTTAC AGTGTCGTGG TCAATGCGCC TTACGACGGC GACCAGACAA TGAGCTTCAA GGCCACTGTG TCCAGCGACG TGACAGGGAC GCTACAGGCT GACACGGCGC AGACCTTGAC CCTGGGACGG CGTGGCCAGA ATGGGCGATT GAGCTTCGCC GGCACGGCCG GGCAAACGCT GGCAGTGCAG GTCGCCGGCC AGACGACTGT TCCATCGGGT CGAACGACGT ACTACACGGT ATACGCACCG GACGGCACGG CGCTGGCCTC TAGCGGCACG ACGTCGGCGA CAACCTTGAA TCTATCGAAC TTGCCGGCAA CCGGCACGTA TACGGTATTT GTCGATCCGT CCAATGGGGA AACGCTCAGC GCACAGCTAA CATTGGCTAC CGGTACTGCT GGCGGCCAGA CGACCAACGG CGCCAGCGGC AGCTATGCAA CGACGGTTCC GGGCCAAAAT GTCTATCTGA CGTTCAAGGC GGCAGCCGGT CAGAACCTGG GCCTGGGGCT GAGCGATTTG GTAACGCCGA ACAGCACGAA CTACGTCTAT CTGACGGTCT ACAAGCCCGA TGGCAGCTAT GCGGCCAGTC AGTATTGCTA CGCCAGCAAC AATGGTTGCC AGACCAACCT CGGCAACACG ATGGCAGGCA CTTATAGTGT CGTGGTCAAT GCGCCTTACG ACGGCGACCA GACAATGAGC TTCAAGGCCA CTGTGTCCAG CGACGTGACA GGGACGCTAC AGGCTGACAC GGCGCAGACC TTGACCCTGG GACGGCGTGG CCAGAATGGG CGATTGAGCT TCGCCGGCAC GGCCGGGCAA ACGCTGGCAG TGCAGGTCGC CGGCCAGACG ACTGTTCCAT CGGGTCGAAC GACGTACTAC ACGGTATACG CACCGGACGG CACGGCGCTG GCCTCTAGCG GCACGACGTC GGCGACAACC TTGAATCTAT CGAACTTGCC GGCAACCGGC ACGTATACGG TATTTGTCGA TCCGTCCAAT GGGGAAACGC TCAGCGCACA GCTGACATTG GCTACCGGTA CTGCTGGCGG CCAGACGACC AACGGCGCCA GCGGCAGCTA TGCAACGACG GTTCCGGGCC AAAATGTCTA TCTGACGTTC AAGGCGGCAG CCGGTCAGAA CCTGGGCCTG GGGCTGAGCG ATTTGGTAAC GCCGAACAGC ACGAACTACG TCTATCTGAC GGTCTACAAG CCCGATGGCA GCTATGCGGC CAGTCAGTAT TGCTACGCCA GCAACAATGG TTGCCAGACC AACCTCGGCA ACACGATGGC AGGCACTTAT AGTGTCGTGG TCAATGCGCC TTACGACGGC GACCAGACAA TGAGCTTCAA GGCCACTGTG TCCAGCGACG TGACAGGGAC GCTACAGGCT GACACGGCGC AGACCTTGAC CCTGGGACGG CGTGGCCAGA ATGGGCGATT GAGCTTCGCC GGCACGGCCG GGCAAACGCT GGCAGTGCAG GTCGCCGGCC AGACGACTGT TCCATCGGGT CGAACGACGT ACTACACGGT GTACGCACCC GATGGCTCGA CGCTGGCCTC GACGAGTGCG ACGTCGGCAA CAACCTTGAA CCTGGCCAGC CTGCCGACGA CAGGAACCTA CACCATGTTC GTCGATCCGT ACTACGGCGA GACCTCCAGT GCGCAGTTGA CGCTCGCCTC ATCGAACTGA
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Protein sequence | MVLLRPSSAP ATWKLAVEKA TSLSANGSTI SQTLTGSAQS KRISFVATAG QNLGLALSDL VTPNSTGGVY LTIYDPDGIY VAYQYCYASN NGCQANFVNA RAGTYSVVIN APYGGDQTMS FKSTLSTDVT GTLKADTAQT LTLGRRGQNG RLAFAGTAGQ TVALQVAGQT TVPSSRMTYY TVYAPDGSTL GSTTATSAAT LNLPNLPATG TYTVFVDPSN GETLSAQLTL ATGTAGGQTT NGASGSYATT VPGQNVYLTF KAAAGQNVGL ALSDLVTPNS TNYVYLTVYK PDGSYAASQY CYASNNGCQT NLGNTMAGTY SVVVNAPYDG DQTMSFKATV SSDVTGTLQA DTAQTLTLGR RGQNGRLSFA GTAGQTLAVQ VAGQTTVPSG RTTYYTVYAP DGTALASSGT TSATTLNLSN LPATGTYTVF VDPSNGETLS AQLTLATGTA GGQTTNGASG SYATTVPGQN VYLTFKAAAG QNLGLGLSDL VTPNSTNYVY LTVYKPDGSY AASQYCYASN NGCQTNLGNT MAGTYSVVVN APYDGDQTMS FKATVSSDVT GTLQADTAQT LTLGRRGQNG RLSFAGTAGQ TLAVQVAGQT TVPSGRTTYY TVYAPDGTAL ASSGTTSATT LNLSNLPATG TYTVFVDPSN GETLSAQLTL ATGTAGGQTT NGASGSYATT VPGQNVYLTF KAAAGQNLGL GLSDLVTPNS TNYVYLTVYK PDGSYAASQY CYASNNGCQT NLGNTMAGTY SVVVNAPYDG DQTMSFKATV SSDVTGTLQA DTAQTLTLGR RGQNGRLSFA GTAGQTLAVQ VAGQTTVPSG RTTYYTVYAP DGTALASSGT TSATTLNLSN LPATGTYTVF VDPSNGETLS AQLTLATGTA GGQTTNGASG SYATTVPGQN VYLTFKAAAG QNLGLGLSDL VTPNSTNYVY LTVYKPDGSY AASQYCYASN NGCQTNLGNT MAGTYSVVVN APYDGDQTMS FKATVSSDVT GTLQADTAQT LTLGRRGQNG RLSFAGTAGQ TLAVQVAGQT TVPSGRTTYY TVYAPDGTAL ASSGTTSATT LNLSNLPATG TYTVFVDPSN GETLSAQLTL ATGTAGGQTT NGASGSYATT VPGQNVYLTF KAAAGQNLGL GLSDLVTPNS TNYVYLTVYK PDGSYAASQY CYASNNGCQT NLGNTMAGTY SVVVNAPYDG DQTMSFKATV SSDVTGTLQA DTAQTLTLGR RGQNGRLSFA GTAGQTLAVQ VAGQTTVPSG RTTYYTVYAP DGSTLASTSA TSATTLNLAS LPTTGTYTMF VDPYYGETSS AQLTLASSN
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