| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01054 |
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| Symbol | pilF |
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| ID | 6306021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2548225 |
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| End bp | 2549013 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642639784 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_001913644 |
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| Protein GI | 188576715 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.5978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCCG TGGCGATCGC GCTGTGCGCG GTTGGCTGCG GTGGGCGTAA TGCCAAGGCA
GGGTCGGTCA AGATCGTGGA AGAGGTCTCG CCGGTGTATT CGTTCCGCGA CAGCGCTGAG
ACCAGGAGCC GTCTGGCGGT GCAGGAGAAA CTCGGCCTCG CCCGTAATCG CCTGCAGACC
GGCGATTACG CCAGTGCCGA AGAACAGGTG CGTGCCGCTC TGAAAAAAGA CGCGCAATCG
GTGGATGCCA TCGGCTTGCT GGCGCTGATT CAGGGCGCCA AGGGCGATAC GGCCGCTGCT
GGTGCCTCGT ACCGGCGCGC TGCGGAACTC GCGCCGCAGC GCGGCGACGT GCTGAATAAC
TACGGCGCCT GGTTGTGTGC GAATGGGTCG CCCGCCGAAG CATTGACCTG GTTTGATCGT
GCATTGGCCG ACCGCACGTA CGCGTCTCCT GCGTATGCAT TGGGAAATGC GGGCGGTTGC
GCGATCAAGG CGGGGCAACT GGAGCGAGCT GCGGGCGATC TGCACAAAGC GCTCGATCTG
GATCCGGATA ATCCATATGC GCTCGAATCA ATGGCGCGCC TGGAAGCGGG GCGTCGCAAT
TATTTCGAAG CCCGCGCTTT TATCGAACGA CGTCTTTCAG CTGCACCGGC AACGGCTTCC
GTGTTACAAC TCGCCATTCA GATTGAGCAA GGGCTAGGCG ACAAGGTAGC TGCCGGCCGT
TACAAACAGC GGTTGGTCAA GGAATTCCCT GACGCAGCGA CCGCTACTCC CGGGGCCAAT
GCATTGTGA
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| Protein sequence | MAAVAIALCA VGCGGRNAKA GSVKIVEEVS PVYSFRDSAE TRSRLAVQEK LGLARNRLQT
GDYASAEEQV RAALKKDAQS VDAIGLLALI QGAKGDTAAA GASYRRAAEL APQRGDVLNN
YGAWLCANGS PAEALTWFDR ALADRTYASP AYALGNAGGC AIKAGQLERA AGDLHKALDL
DPDNPYALES MARLEAGRRN YFEARAFIER RLSAAPATAS VLQLAIQIEQ GLGDKVAAGR
YKQRLVKEFP DAATATPGAN AL
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