Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00968 |
Symbol | fliR |
ID | 6306103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2637361 |
End bp | 2638134 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642639866 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_001913726 |
Protein GI | 188576797 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0109707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGATCG ACGGCCAGCG CGCGTTCGCG ATGGTCGGGG CGATCATGTG GACCATGCTG CGTACCGGTG CGTTGCTCAC CGCTATGCCG TTGATCGGCA CGCGCGCCGT GCCCGGACGG GTGCGGGTGA TGCTGGCCGG GACGCTGGCA ATGGTGCTGG CGCCGATCCT GCCGCCGGTG CCGGAGTGGG ACGGTTTTAC CGCACAGGCG GTGCTGAGCA TCGCGCGCGA GCTGGCGATC GGGGCCAGCA TGGGCTTCAT GCTGAAGCTG ATTTTCGAAG CCGGCGCATT GGCCGGCGAG CTGGTGTCGC AGTCCACCGG CCTGTCGTTC GCACAGATGT CCGACCCCAT GCGCGGCGTG ACGTCGGGCG TGATCGCGCA GTGGTTCTAC ATCGGCTTCG GGCTGCTGTT CTTCGCGGCT AACGGCCATC TGGCGGTGAT CGCACTGCTG GTGGATAGCT ATAAAGCCTT GCCGATCGGC ACCGCATTGC CCGATGCCGG CGCATTCGCC GAAGTAGCGC CCACCCTGTT TCTGCAGATC CTGCGCGGCG GGCTGACCCT GGCGTTGCCG ATGATGGTGG CGATGCTGGC GGTCAACCTG GCCTTCGGCG CGCTGTCCAA GGCCGCGCCG GCGTTGAATC CGGTGCAGTT GGGCTTGCCG CTGACGGTGT TGCTGGGGCT GTTCCTGTTG TCGAGCTTCG CCAGCGAATT CGCCCCCCCT GTGCAGCGCA TGTTCGATAC CGCATTCGAC GCCGCCAGAA AATTGACCGC GTAG
|
Protein sequence | MVIDGQRAFA MVGAIMWTML RTGALLTAMP LIGTRAVPGR VRVMLAGTLA MVLAPILPPV PEWDGFTAQA VLSIARELAI GASMGFMLKL IFEAGALAGE LVSQSTGLSF AQMSDPMRGV TSGVIAQWFY IGFGLLFFAA NGHLAVIALL VDSYKALPIG TALPDAGAFA EVAPTLFLQI LRGGLTLALP MMVAMLAVNL AFGALSKAAP ALNPVQLGLP LTVLLGLFLL SSFASEFAPP VQRMFDTAFD AARKLTA
|
| |