Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00920 |
Symbol | |
ID | 6305917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2446788 |
End bp | 2447372 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642639682 |
Product | oligoribonuclease |
Protein accession | YP_001913542 |
Protein GI | 188576613 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0529998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGA ACCTTGCAGG CAACGACCGA CTGATCTGGA TCGATCTGGA AATGACCGGC CTGGATACCG ATCGCGATTC GATTATCGAG ATCGCCACCA TCGTGACCGA TGCGCAGTTG AACGTGCTTG CCGAGGGGCC GGAACTGGCC ATCGCGCATC CGCTGGAAAC CCTGGAAGCG ATGGACGAGT GGAACCGCAA TCAGCACCGC CGTTCGGGTC TTTGGCAGCG CGTGCTCGAC AGCCAGGTCA CCCATGCGCA GGCCGAAGCG CAGACCGTGG CATTCCTGGG CGAGTGGATC CGCGCTGGCG CCTCGCCGAT GTGCGGCAAC TCGATCTGCC AGGATCGCCG CTTCCTGCAT CGGCAGATGT CGCGCCTTGA GCGCTATTTC CATTACCGCA ATTTGGATGT GTCCACCATC AAGGAACTTG CGCGGCGTTG GGCGCCGACG GTGGCCAATG GGTTTGCCAA GAGTTCTGCG CATACCGCCC TCAGCGATGT GCGCGATTCG ATCAATGAGC TGCGTCACTA CCGTCAATTC ATGGGTGCAC TTGGTGGCGA TACCGCTATG GATGTGGAAG GCTGA
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Protein sequence | MAENLAGNDR LIWIDLEMTG LDTDRDSIIE IATIVTDAQL NVLAEGPELA IAHPLETLEA MDEWNRNQHR RSGLWQRVLD SQVTHAQAEA QTVAFLGEWI RAGASPMCGN SICQDRRFLH RQMSRLERYF HYRNLDVSTI KELARRWAPT VANGFAKSSA HTALSDVRDS INELRHYRQF MGALGGDTAM DVEG
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