| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00891 |
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| Symbol | rpsA |
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| ID | 6305945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2475469 |
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| End bp | 2477154 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642639709 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001913569 |
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| Protein GI | 188576640 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0317797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAT CTTTTGCAGA ACTGTTCGAA GCCAGTCAAG CCAATCTGGC GAAGCTGAAG
CCGGGCTCCA TCGTCACCGG TACCGTCGTG GAAGTGCGCG GCGACGTGGT GGTGATCAAC
GCTGGCCTGA AGTCCGAAGG CATCGTGCCG ATCGAGCAGT TCCGTAACGA CGCTGGCGAG
ATCGATGTCG GCGTCGGCGA CCAGGTCAAG GTCGCCCTCG ATTCCATCGA GAACGGTTTC
GGTGAGACCG TGCTGTCGCG CGAGAAAGCC AAGCGCGCAA TGGTGTGGGA CGAGCTGGAA
GATGCGTTGG AAAATAACGA AACCATCACC GGCCGCATCA GCGGCAAGGT CAAGGGTGGT
TTCACCGTGG ACATCAAGGA TGTCCGCGCG TTCCTGCCTG GTTCGCTGGT GGATGTGCGC
CCGGTGCGCG ACCCGGCCTA CCTGGAAGGC AAGGAACTCG AGTTCAAGCT GATCAAGCTG
GACCGCAAGC GCAATAACGT GGTGGTTTCG CGTCGTGCAG TGGTCGAAAG CGAGCACTCG
GAAGAGCGCG AGCAGCTGAT GGACAAGCTG CAGGAAGGCG CGATCCTGAA GGGTGTCGTC
AAGAACCTGA CCGACTACGG CGCATTCGTG GACCTGGGCG GTATCGACGG CCTGCTGCAC
ATCACCGACA TGGCCTGGAA GCGCGTGCGC CATCCGTCCG AAGTCGTCAA CGTCGGCGAC
GAGCTGGACG TGCGCGTGCT GAAGTTCGAT CGCGAGCGTA ACCGCGTCAG CCTCGGCCTG
AAGCAGCTGG GCGAAGATCC GTGGGACAAC ATCGCCCGTC GTTACCCGGC CAACAGCCGC
GTGTTCGGCA AGGTTTCCAA CGTCACCGAT TACGGCGCAT TCGTCGAGAT CGAGCCGGGC
GTCGAAGGTC TGGTGCACGT CTCCGAGATG GATTGGACCA ACAAGAACGT CAACCCGTCC
AAGGTTGTGC AGGTGGGTGA CGAAGTCGAA GTGATGGTGC TGGACGTCGA TGAAGAGCGT
CGCCGCATCT CGCTGGGCAT GAAGCAGGTT GCCGCCAATC CGTGGGAAAC CTTCGCTGCG
ACCCACAAGA AGAACGACAA GGTGTCCGGT CAGATCAAGT CGATCACCGA CTTCGGCATC
TTCATCGGTC TGGACGGCGG CATCGACGGT CTGGTGCACC TGTCCGACAT CAGCTGGAAC
ACCACCGGTG AAGATGTCGT GCGCAACTAC AAGAAGGGCG ACACGCTGGA AGCCGTCGTG
CTGGCAGTGG ACCCGGAACG TGAGCGCATC AGCCTGGGCG TCAAGCAGCT GGAGCAGGAC
CCGTTCGGTC AGTACATGGC GTCCAACCCG AAGGGTTCGA AAGTCGAAGG CGTGGTGCGT
GAGGTGGATG CCAAGGGCGC CACGATCGAC CTGGCCGATG GCATCGAAGG CTACGTCGCT
TCACGCGACA TCGCCAACGA GCGCGTCGAC GATGCGACCC AGCACCTGAA GGTCGGCGAC
AAGATCGAAG CCAAGTTCGT GGGCATGGAC CGCAAGGGCC GTACCCTGCA GCTGTCGATC
AAGGCCAAGG ACGATGCCGA AATGCGCGAA ACGCTGGAGG ACTACCAGTC TGCTTCCGCG
TCAGGCGGCA TGACTCAGCT GGGCGCGCTG CTGCGTGCAC AGTTGAACAG CAACAAGTCC
GAGTAA
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| Protein sequence | MTESFAELFE ASQANLAKLK PGSIVTGTVV EVRGDVVVIN AGLKSEGIVP IEQFRNDAGE
IDVGVGDQVK VALDSIENGF GETVLSREKA KRAMVWDELE DALENNETIT GRISGKVKGG
FTVDIKDVRA FLPGSLVDVR PVRDPAYLEG KELEFKLIKL DRKRNNVVVS RRAVVESEHS
EEREQLMDKL QEGAILKGVV KNLTDYGAFV DLGGIDGLLH ITDMAWKRVR HPSEVVNVGD
ELDVRVLKFD RERNRVSLGL KQLGEDPWDN IARRYPANSR VFGKVSNVTD YGAFVEIEPG
VEGLVHVSEM DWTNKNVNPS KVVQVGDEVE VMVLDVDEER RRISLGMKQV AANPWETFAA
THKKNDKVSG QIKSITDFGI FIGLDGGIDG LVHLSDISWN TTGEDVVRNY KKGDTLEAVV
LAVDPERERI SLGVKQLEQD PFGQYMASNP KGSKVEGVVR EVDAKGATID LADGIEGYVA
SRDIANERVD DATQHLKVGD KIEAKFVGMD RKGRTLQLSI KAKDDAEMRE TLEDYQSASA
SGGMTQLGAL LRAQLNSNKS E
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