| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00822 |
|---|
| Symbol | thrC |
|---|
| ID | 6305873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 2406552 |
|---|
| End bp | 2407856 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642639638 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_001913499 |
|---|
| Protein GI | 188576570 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00943473 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCATCT CCACCCGTGG CGGTGCCCCC GCCGCAAGCC TGAGCCAGGC CATTGCCGCC
GGGCTGGCGC CCGATGGCGG CCTCTACGTG CCACAGACCC TGCCACCTGC CCGTACGCTG
ATTGCGGGCG CCGGCCTTGC CGACACCGCC ACTGCGCTAT TGCAGCCATT TTTCGAGGGC
GATGCACTGG CGGCAGAACT CTCTGCCATC TGTGCCGAGG CCTTCGATTT CCCGGCGCCA
TTGGTGGCCT TGGGTACGCC GGGCGATTAC GCGCTGGAGC TGTTTCATGG CCCCACCGCC
GCATTCAAGG ATTTCGGTGC GCGTTTCCTG GCGGCCTGCC TGACCCGCCT GCGCCGTGCC
GAAGACCGCC CGCTCACCAT CCTGGTCGCC ACCTCCGGCG ACACCGGTGC CGCCGTGGCC
GCTGCGTTCC ATCGGCAGCC TGGCCTGCGT GTGGTGGTGC TCTACCCGGA CGGCCGCGTG
TCGCCACGCC AGGCGCATCA GCTGGGGTGT TTCGGCGACA ACATTCAGGC CCTGCGTGTG
GCCGGCTCGT TCGACGACTG CCAGGCGATG GTCAAACAGG CCTTGAACGA TGCCGCGTTG
CAGACGCAGG TGCCGCTGAG TTCGGCCAAC AGCATCAGCC TGGGCCGGCT GCTGCCGCAG
ATGAGTTACT ACGCGCATGC CGCGCTGCAG CACCATGCGG CGTGGGGCGA CGTGCTCAAC
CTGGTGGTGC CCACCGGCAA CCTGGGCAAC GCGCTGGCGG CGATCATCGC GCGCGCGCTC
GGGGTGCCAT TAGGCCGCAT CGCGCTGGCC TCCAACGCCA ACCATGTCTT GCCGGACTAT
TTCGCTGGCG ACGCGTACGC GCCGCAGCCC AGCGTGGCCA CGCTGGCCAA TGCGATGGAC
GTGGGCGCGC CGAGCAATTT CGAGCGGCTG CGTTGGCTCT ACAACGGCGA CGATGCCGCC
TTGCGCGAGG AATTCCGTGC GTTGTCGGTG GACGACGCAG CGATTCGCCA CACCGTGCAG
CAGCGTTTCG CGCGCTATGG CGAGGTGCAT TGCCCGCATA CCGCCACCGC GGTGCATGTG
CTTGAACAAC TGCGTGCCGA GGGCGCGGAG GGCGGCACCG GCGATTGGGC GGTGGCGGCC
ACGGCGCATC CGGCCAAGTT CGAAGGCGTG GTGGAGCCAT TGATCGGCCG GACGGTGGAG
GTTCCGCCGG CGCTGGCCGC GCTGCTGCAG CGCCCAGCGC AAGCCGAAGC ACTGGCGGCG
GACTATGCGG CTTTCCGGCA GCGTCTGCTT GCGGATGCGA CCTGA
|
|---|
| Protein sequence | MFISTRGGAP AASLSQAIAA GLAPDGGLYV PQTLPPARTL IAGAGLADTA TALLQPFFEG
DALAAELSAI CAEAFDFPAP LVALGTPGDY ALELFHGPTA AFKDFGARFL AACLTRLRRA
EDRPLTILVA TSGDTGAAVA AAFHRQPGLR VVVLYPDGRV SPRQAHQLGC FGDNIQALRV
AGSFDDCQAM VKQALNDAAL QTQVPLSSAN SISLGRLLPQ MSYYAHAALQ HHAAWGDVLN
LVVPTGNLGN ALAAIIARAL GVPLGRIALA SNANHVLPDY FAGDAYAPQP SVATLANAMD
VGAPSNFERL RWLYNGDDAA LREEFRALSV DDAAIRHTVQ QRFARYGEVH CPHTATAVHV
LEQLRAEGAE GGTGDWAVAA TAHPAKFEGV VEPLIGRTVE VPPALAALLQ RPAQAEALAA
DYAAFRQRLL ADAT
|
|---|
| |