| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00737 |
|---|
| Symbol | |
|---|
| ID | 6305651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 2178014 |
|---|
| End bp | 2178976 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642639419 |
|---|
| Product | tRNA synthetases class II (D, K and N) subfamily |
|---|
| Protein accession | YP_001913286 |
|---|
| Protein GI | 188576357 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.885463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGG CGCAGCTCGA TCTGGCCGCG TTGCAGTTGC GGGCCCGGCT CAACGCCACG
ATCCGCAACT TCTTCGCCGA GCGCGGCGTG CTGGAAGTGG AAACGCCGGT GCTCTCGCAG
GCCGGCAACA CCGAACCGAA TATCGAAAGT TTCAGCACGC GCTTTACCGG CCATGTCGAC
GCCGGTGCGC CGGTGCGCTG GTTGCGCACT TCGCCAGAAT ATCCGCTCAA ACGCCTGCTT
GCCGCCGGCG CGGGCGATTG CTACGAACTG GGGCGGGTGT TTCGCAATGG CGAAGCCGGT
GGCCGCCACA ACCCCGAGTT CAGCATGCTC GAGTGGTATC GGATCGGCTG GAACGACCGC
AGCCTGGCGC AGGAAACCAT CGCGCTGATA CGCCGCGCAC TCGCGCTGGT CGGCCGCGAC
GCCGCAGTGC AGGTGCTGAC GTATCGTGCA CTGTTCGTGC AGAGGTTGGG CATCGACCCG
CTGCGCGATC CGATCGAAAC GCTACGCGCC GCGCTGCATG ACGTGGCCAT CGATCCCGCT
GGCCTGACCC GCGACGATTG GCTGGACCTG CTGATGACCC ATCGCATCCA GCCGGGCTTT
GCCAGCGACA CGTTGACGGT GGTGCACGAC TGGCCAGCCA GCCAGTGCGC ACTGGCGCGT
GTGCGCCACG ACGATCCGCC GGTGGCCGAG CGCTTCGAGC TGTACCTGGG CAGCGTCGAG
GTGGCCAATG GCTATCACGA ACTGAACGAT GCGCAGGAGC AGCGTGCGCG CTTCGTGCGC
GACAACGCCG TGCGTGCGGT GCGTGGATTG CCGCAGCTAC CGCTGGATGA ACGCCTGCTC
GCGGTGTTGT CGCAGTTGCC CGACTGCGCC GGTGTGGCGG TGGGTGTGGA TCGCTTGTTG
ATGGCCTTGC GCGGCACCGC GCAGATTGCC GACGTGCTGG CCTTCGACTT CGCCCGCGCC
TGA
|
|---|
| Protein sequence | MSTAQLDLAA LQLRARLNAT IRNFFAERGV LEVETPVLSQ AGNTEPNIES FSTRFTGHVD
AGAPVRWLRT SPEYPLKRLL AAGAGDCYEL GRVFRNGEAG GRHNPEFSML EWYRIGWNDR
SLAQETIALI RRALALVGRD AAVQVLTYRA LFVQRLGIDP LRDPIETLRA ALHDVAIDPA
GLTRDDWLDL LMTHRIQPGF ASDTLTVVHD WPASQCALAR VRHDDPPVAE RFELYLGSVE
VANGYHELND AQEQRARFVR DNAVRAVRGL PQLPLDERLL AVLSQLPDCA GVAVGVDRLL
MALRGTAQIA DVLAFDFARA
|
|---|
| |