Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00625 |
Symbol | |
ID | 6305765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2299777 |
End bp | 2301081 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642639532 |
Product | arsenical membrane pump |
Protein accession | YP_001913397 |
Protein GI | 188576468 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.132136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGCCC TCGCGATCTT CATCGTCACC CTTGTGTTCG TCATCTGGCA GCCGCGCGGA CTCGGCATAG GCTGGTCGGC AATGGCCGGC GCCGCGGTGG CTCTGGCCAC CGGCGTTGTC GGGTGGAACG ATGTTGGCAC GGTCTGGGGG ATCGTCTGGG ATGCGACCTT CACCTTCGTC GCACTCATCA TCATCTCGCT CATCCTGGAC GCGGCCGGCT TCTTCGCATG GGCGGCCCTG CATGTGGCCC GCTGGGGCGG CGGCAATGGT CGAAAGCTCT TTCCGCTGAT CGTCCTGCTG GGCGCATCGA TCGCTGCAGT GTTCGCCAAC GACGGCGCGG CCCTTCTGCT GACGCCGATC GTCCTGGCCA TCCTGCTGCG CTTGAATTTC CCGCCCGCTG GAGCGCTGGC GTTTACTGTG GCCTGCGGCT TCATCGCTGA CACGGCAAGC CTGCCGCTCG TGGTCTCCAA TCTGGTCAAC ATCGTCACAG CGAACTTCTT TGACGTGTCG TTCGGGCGCT ACGCAGCGGT CATGGTGCCG GTGAACCTGG TGTCGGTCGG AGCGACGCTG ATTGTCCTGT GGCTTTGGTT TCGGCACGAC ATTCCCCGCG CCTATCCTGT CGAGGATCTC GAAGCGCCGC GCCAAGTGAT CCGCGACACG GCGGTCTTCC GCGCCGCCTT GCCCCTTCTC GCATTGCTGC TCGTTGCGTA CTTTGTGACC GGACCGCTAG GCGTGCCCAT CGCCTTGGTG ACGGGTGCGG CCGCGCTGGT GTTGATGGCG ATTGCGGGCC GCTGGGCGAC AGGCGGCCGT GGCGCTACCA TGGCCTTGAC CAAGATCTTG CGCGGCGCGC CCTGGCAGAT CGTGCTGTTT TCGGTCGGCA TGTATCTGGT GGTCTACGGC CTGGGCAATG CCTGGCTGAC CGGCGCGGCG AGCGCTGTCC TGGAGTGGCT GGCGGCGCAG GGGACCTTCG TGGCCACGGT GGGCACTGGC TTCGCGGTGG CCGCGCTTGC CTCGGTCATG AACAACATGC CCGCAACGCT GGTCGGCGCG CTTGCCATCG ACGGGGCGCA CGTTCCTACC GCCACCCGTG AACTGATGAT CTATGCCAAC GTCGTGGGCA ACGATCTTGG CCCCAAGCTA ACCCCGATCG GCTCGCTCGC GACCCTTCTG TGGCTGCACG TTCTTGCCGG CAAGGGTCAG CGGATCACGT GGGGCCAGTA CATGAAGGTG GGGCTCATCC TCACGCCCCC CGTCCTGTTG GCCACGCTCA TCGCGCTCTG GATCTGGCTG CCGCTCGCGG GTTGA
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Protein sequence | MLALAIFIVT LVFVIWQPRG LGIGWSAMAG AAVALATGVV GWNDVGTVWG IVWDATFTFV ALIIISLILD AAGFFAWAAL HVARWGGGNG RKLFPLIVLL GASIAAVFAN DGAALLLTPI VLAILLRLNF PPAGALAFTV ACGFIADTAS LPLVVSNLVN IVTANFFDVS FGRYAAVMVP VNLVSVGATL IVLWLWFRHD IPRAYPVEDL EAPRQVIRDT AVFRAALPLL ALLLVAYFVT GPLGVPIALV TGAAALVLMA IAGRWATGGR GATMALTKIL RGAPWQIVLF SVGMYLVVYG LGNAWLTGAA SAVLEWLAAQ GTFVATVGTG FAVAALASVM NNMPATLVGA LAIDGAHVPT ATRELMIYAN VVGNDLGPKL TPIGSLATLL WLHVLAGKGQ RITWGQYMKV GLILTPPVLL ATLIALWIWL PLAG
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