Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00603 |
Symbol | sdhD |
ID | 6305791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2324417 |
End bp | 2324803 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642639557 |
Product | succinate dehydrogenase, hydrophobic membrane anchor protein |
Protein accession | YP_001913421 |
Protein GI | 188576492 |
COG category | [C] Energy production and conversion |
COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCGCT ACCGTACCCC GTTGAAAAAC GTGCGCGGCC TGGGCGCCGC CAAGACCGGT ACCGAACATT TCGTGATGCA GCGCCTGACC GCGGCCGCAC TGGTGCCGTT GTCGATCTGG TTCCTGATCT TCGTGCTGAG CCTCATGGGT GCCGATCATG CTGCGGCGAC CGCCGCAGTG GCTAAACCGT GGAATGCGAT TCTGCTTGTC GCTTTCCTGA TTGCCTCGTT CTGGCATGCG CAGCTGGGCA TGCAGGTGGT GCTGGAAGAT TACGTGCACG ACTCGTTGCT CGCACTGACG GCGCAGACAC TCGTGCGTTT CGTTGCCGTG GTGGGCGCCA TCGTCAGCGT GTTTGCCGTG GCGCGTATCG CGCTGGGCAT GAGCTGA
|
Protein sequence | MSRYRTPLKN VRGLGAAKTG TEHFVMQRLT AAALVPLSIW FLIFVLSLMG ADHAAATAAV AKPWNAILLV AFLIASFWHA QLGMQVVLED YVHDSLLALT AQTLVRFVAV VGAIVSVFAV ARIALGMS
|
| |