Gene PXO_00589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00589 
Symbol 
ID6305805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp2336110 
End bp2336574 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content64% 
IMG OID642639571 
Productbiopolymer transport protein 
Protein accessionYP_001913435 
Protein GI188576506 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.265658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCG GCAGCGCCCG AAGCCAGGAC GAGCCGCATA TCGATCTGGT GCCATTGATT 
GACGTCATCC TCGTCCTCAT CATCTTTTTC GTGGTGACCA CGACCTTCGA CGCACGCTCC 
ACGCTGCAGT TGCAGCTGCC GACCGCCAGC GACCAACACA CCAGCACACC GCCGCGCTCG 
TTGAGCGTGC TGGTCAATGC CGATGGGCAT TACTTCATCA ACGACCAGGA AGTGCTGCGC 
TCGGATGTCG ACTCGCTCAA GCAGACCATC GCCCAGATCG CCGGCGATGA TCGCGAGCAG 
ACCGTGTTGA TGCGTGCCGA TGCACGGACC CCGTATCAGG CCGTAGTCAC TGCGCAGGAT 
GCGCTGGGTC AGCTCGGCTT CCGGCGCATC GCCATCGCCA CCGCGCCCCC AGCCGGCGCC 
ACCAGCACGG CAGGCAAGAC AAGCACGAAC GGAACCCGCC AGTGA
 
Protein sequence
MRIGSARSQD EPHIDLVPLI DVILVLIIFF VVTTTFDARS TLQLQLPTAS DQHTSTPPRS 
LSVLVNADGH YFINDQEVLR SDVDSLKQTI AQIAGDDREQ TVLMRADART PYQAVVTAQD 
ALGQLGFRRI AIATAPPAGA TSTAGKTSTN GTRQ