| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00572 |
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| Symbol | pthXo6 |
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| ID | 6305825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2354996 |
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| End bp | 2358139 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642639591 |
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| Product | TAL effector AvrBs3/PthA |
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| Protein accession | YP_001913452 |
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| Protein GI | 188576523 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGGCCA TCGCCAGCAA TATTGGCGGC AACCAGGCGC TGGAGACGGT ACAGCGGCTG
TTGCCGGTAC TGTGCCAGGA CCATGGCCTG ACCCCGGACC AGGTCGTGGC CATCGCCAGC
CATGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC
CATGGCCTGA CCCCGGACCA GGTGGTGGCC ATCGCCAGCA ATATTGGCGG CAAGCAGGCG
CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG ACCATGGCCT GACCCCGGCC
CAGGTGGTGG CCATCGCCAG CAATAACGGC GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG
CTGTTGCCGG TGCTGTGCCA GGCCCATGGC CTGACCCCGG ACCAGGTGGT GGCTATCGCC
AGCAATAACG GCGGCAAGCA GGCGCTGGAG ACGGTGCAAC GGCTGTTGCC GGTGCTGTGC
CAGGCCCATG GCCTGACCCC GGACCAAGTG GTGGCCATCG CCAACAATAA CGGCGGCAAG
CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGAGT
CCGGACCAGG TGGTGGCCAT CGCCAACAAT AACGGCGGCA AGCAGGCGCT GGAGACGCTG
CAGCGGCTGT TGCCGGTGCT GTGCCAGACC CATGCCCTGA CCCCGGACCA GGTGGTGGCC
ATCGCCAACA ATAACGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG
CTGTGCCAGG ACCATGGCCT GACCCCGGAC CAGGTGGTGG CCATCGCCAG CCACGATGGC
GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGACCATGGC
CTGACCCCGG ACCAGGTGGT GGCCATCGCC AGCAATATTG GCGGCAAGCA GGCGCTGGAG
ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAGGTG
GTGGCCATCG CCAGCCACGA TGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG
CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGCCCAGG TGGTGGCCAT CGCCAGCCAT
GGCGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGCC
CATGGCCTGA CCCCAGACCA GGTCGTGGCC ATCGCCAGCC ACGATGGCGG CAAGCAGGCG
CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG CCCATGGCCT GACCCCGAAC
CAGGTGGTGG CCATCGCCAG CAATATTGGC GGCAAGCAGG CGCTGGAGAC GGTGCAACGG
CTGTTGCCGG TGCTGTGCCA GGACCATGGC CTGACCCCGG ACCAGGTCGT GGCCATCGCC
AGCAATGGCG GCAAGCAGGC GCTGGAGACG GTGCAGCGGC TGTTGCCGGT GCTGTGCCAG
GCTCATGGCC TGACCCCGGA CCAAGTGGTG GCCATCGCCA GTAATAGTGG CGGCAAGCAG
GCGCTGGAGA CGGTGCAGCG GCTGTTGCCG GTGCTGTGCC AGGACCATGG CCTGACCCCG
AACCAAGTGG TGGCCATCGC CAGCAATATT GGCGGCAAGC AGGCGCTGGA GACGGTGCAG
CGGCTGTTGC CGGTGCTATG CCAGGACCAT GGCCTGACCC CAGACCAGGT GGTGGCCATC
GCCAGCAATA TTGGCGGCAA GCAGGCGCTG GAGACGGTGC AGCGGCTGTT GCCGGTGCTG
TGCCAGGACC ATGGCCTGAC CCTGGACCAG GTGGTGGCCA TCGCCAGCCA TGGCGGCGGC
AAGCAGGCGC TGGAGACGGT GCAGCGGCTG TTGCCGGTGC TGTGCCAGGA CCATGGCCTG
ACCTCGGACC AGGTGGTGGC CATCGCCAGC CACGATGGCG GCAAGCAGGC GCTGGAGACG
GTGCAGCGGC TGTTGCCGGT GCTGTGCCAG GACCATGGCC TGACCCCGGA CCAGGTGGTG
GCCATCGCCA GCAATAGTGG CGGCAAGCAG GCGCTGGAGA CGGTGCAGCG GCTGTTGCCG
GTGCTGTGCC AGGACCATGG CCTGACCCCG GCGCAGGTGG TGGCCATCGC CAGCAATAGT
GGCGGTAAGC AGGCGCTGGA GACGGTGCAA CGGCTGTTGC CGGTGCTGTG CCAGGCCCAT
GGTCTGACCC CGAACCAGGT GGTGGCCATT GCCAGCAATG GCGGCGGCAA GCAGGCGCTG
GAGAGCATTG TTGCCCAGTT ATCTCGCCCT GATCCGGCGT TGGCCGCGTT GACCAACGAC
CACCTCGTCG CCTTGGCCTG CCTCGGCGGA CGTCCTGCCC TGGATGCAGT GAAAAAGGGA
TTGCCGCACG CGCCGAACTT GATCAGAAGA GTCAATAGCC GTATTGGCGA ACGCACGTCC
CATCGCGTTG CCGACCTCGC GCAAGTGGTT CGCGTGCTGG AGTTTTTCCA GTGCCACTCC
CACCCAGCGC ACGCATTTGA TGAGGCCATG ACGCAGTTCG GGATGAGCAG GAACGGGTTG
TTACAGCTCT TTCGCAGAGT GGGCGTCACC GAACTCGAAG CCCGCGGTGG AACGCTCCCC
CCAGCCTCGC AGCGTTGGGA CCGTATCCTC CAGGCATCAG GGATGAAAAG GGCCAAACCG
TCCCCTACTT CAGCTCAAAC ACCGGATCAG GCGTCTTTGC ATGCATTCGC CGATTCGCTG
GAGCGTGACC TTGATGCGCT CAGCCCAATG CACGAGGGAG ATCAGACGCG GGCAAGCAGC
CGTAAACGGT CCCGATCGGA TCGTGCTGTC ACCGGCCCCT CCGCACAGCA ATCTTTCGAG
GTGCGCGTTC CCGAACAGCA CGATGCGCTG CATTTGCCCC TCAGCTGGAG GGTAAAACGC
CCGCGTACCA GGATCGGGGG CGGCCTCCCG GATCCTGGTA CGCCCATCGC TGCCGACCTG
GCAGCGTCCA GCACCGTGAT GTGGGAACAA GATGCGGCCC CCTTCGCAGG GGCAGCGGAT
GATTTCCCGG CATTCAACGA AGAGGAACTC GCATGGTTGA TGGAGCTATT GCCTCAGTCA
GGCTCAGTCG GAGGGACGAT CTGA
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| Protein sequence | MVAIASNIGG NQALETVQRL LPVLCQDHGL TPDQVVAIAS HGGKQALETV QRLLPVLCQD
HGLTPDQVVA IASNIGGKQA LETVQRLLPV LCQDHGLTPA QVVAIASNNG GKQALETVQR
LLPVLCQAHG LTPDQVVAIA SNNGGKQALE TVQRLLPVLC QAHGLTPDQV VAIANNNGGK
QALETVQRLL PVLCQDHGLS PDQVVAIANN NGGKQALETL QRLLPVLCQT HALTPDQVVA
IANNNGGKQA LETVQRLLPV LCQDHGLTPD QVVAIASHDG GKQALETVQR LLPVLCQDHG
LTPDQVVAIA SNIGGKQALE TVQRLLPVLC QDHGLTPDQV VAIASHDGGK QALETVQRLL
PVLCQDHGLT PAQVVAIASH GGGKQALETV QRLLPVLCQA HGLTPDQVVA IASHDGGKQA
LETVQRLLPV LCQAHGLTPN QVVAIASNIG GKQALETVQR LLPVLCQDHG LTPDQVVAIA
SNGGKQALET VQRLLPVLCQ AHGLTPDQVV AIASNSGGKQ ALETVQRLLP VLCQDHGLTP
NQVVAIASNI GGKQALETVQ RLLPVLCQDH GLTPDQVVAI ASNIGGKQAL ETVQRLLPVL
CQDHGLTLDQ VVAIASHGGG KQALETVQRL LPVLCQDHGL TSDQVVAIAS HDGGKQALET
VQRLLPVLCQ DHGLTPDQVV AIASNSGGKQ ALETVQRLLP VLCQDHGLTP AQVVAIASNS
GGKQALETVQ RLLPVLCQAH GLTPNQVVAI ASNGGGKQAL ESIVAQLSRP DPALAALTND
HLVALACLGG RPALDAVKKG LPHAPNLIRR VNSRIGERTS HRVADLAQVV RVLEFFQCHS
HPAHAFDEAM TQFGMSRNGL LQLFRRVGVT ELEARGGTLP PASQRWDRIL QASGMKRAKP
SPTSAQTPDQ ASLHAFADSL ERDLDALSPM HEGDQTRASS RKRSRSDRAV TGPSAQQSFE
VRVPEQHDAL HLPLSWRVKR PRTRIGGGLP DPGTPIAADL AASSTVMWEQ DAAPFAGAAD
DFPAFNEEEL AWLMELLPQS GSVGGTI
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