Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00505 |
Symbol | talC3b |
ID | 6305344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1864934 |
End bp | 1866895 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642639114 |
Product | TAL effector AvrBs3/PthA |
Protein accession | YP_001912987 |
Protein GI | 188576058 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.467766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCGCAG TGGAGGCAGT GCATGCATGG CGCAATGCAC TGACGGGTGC CCCCCTGAAC CTGACCCCGG ACCAAGTGGT GGCCATCGCC AGCAATAGTG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAGGTC GTGGCCATCG CCAGCCACGA TGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TGGTGGCCAT CGCCAGCAAT GGCGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA GGTGGTGGCC ATCGCCAGCA ATGGCGGCGG CAAGCAGGCG CTGGAGACGG TACTGTGCCA GGCCCATGGC CTGACCCCGG CGCAGGTGGT GGCCATCGCC AGCAATGGCG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGCCCATG GCCTGACCCT GGACCAGGTC GTGGCCATTG CCAGCAATGG CGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGCCCA TGGCCTGACC CCGGCGCAGG TGGTGGCCAT CGCCAGCAAT GGCGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGCC CATGGCCTGA CCCCGGCCCA GGTGGTGGCC ATCGCCAGCC ACGATGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG CCCATGGTCT GACCCTGGAC CAGGTAGTGG CCATTGCCAG CCACGATGGC GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGCCCATGGT CTGACCCTGG ACCAGGTCGT GGCCATCGCC AGCCACGATG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GTCTGACCCC GGCGCAGGTG GTGGCCATCG CCAGCAATAA CGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TGGTGGCCAT CGCCAGCCAC GATGGCGGCA AGCAGGCGCT GGAGACGATG CAGCGGCTGT TGCCGGTGCT GTGCCAGGCC CATGGCCTGA CCCCGGACCA GGTCGTGGCC ATCGCCAGCA ATGGCGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG CCCATGGCCT GACCCCGGAC CAGGTCGTGG CCATCGCCAG CCACGATGGC GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGACCATGGC CTGACCCCGG ACCAGGTCGT GGCCATCGCC AGCCACGATG GCGGCAAGCA GGCGCTGGAG ACGGTGCAAC GGCTGTTGCA GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAGGTC GTGGCCATCG CCAGCCACGA TGGCGGCAAG CAGGCGCTGG AGACGGTGCA ACGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TCGTGGCCAT CGCCAGCCAC GATGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA GGTCGTGGCC ATCGCCAGCA ATGGCGGCAA GCAGGCGCTG GAGAGCATTG TTGCCCAGTT ATCTCGCCGT GATCCGGCGT TGGCCGCGTT GACCAACGAC CAACTCGTCG CCTTGGCCTG CCTCGGCGGA CGTCCTGCCC CGCATTCAAG GAAGAGGAAA TCGCATGATT GA
|
Protein sequence | MTAVEAVHAW RNALTGAPLN LTPDQVVAIA SNSGGKQALE TVQRLLPVLC QDHGLTPDQV VAIASHDGGK QALETVQRLL PVLCQDHGLT PDQVVAIASN GGGKQALETV QRLLPVLCQD HGLTPDQVVA IASNGGGKQA LETVLCQAHG LTPAQVVAIA SNGGGKQALE TVQRLLPVLC QAHGLTLDQV VAIASNGGGK QALETVQRLL PVLCQAHGLT PAQVVAIASN GGGKQALETV QRLLPVLCQA HGLTPAQVVA IASHDGGKQA LETVQRLLPV LCQAHGLTLD QVVAIASHDG GKQALETVQR LLPVLCQAHG LTLDQVVAIA SHDGGKQALE TVQRLLPVLC QDHGLTPAQV VAIASNNGGK QALETVQRLL PVLCQDHGLT PDQVVAIASH DGGKQALETM QRLLPVLCQA HGLTPDQVVA IASNGGGKQA LETVQRLLPV LCQAHGLTPD QVVAIASHDG GKQALETVQR LLPVLCQDHG LTPDQVVAIA SHDGGKQALE TVQRLLQVLC QDHGLTPDQV VAIASHDGGK QALETVQRLL PVLCQDHGLT PDQVVAIASH DGGKQALETV QRLLPVLCQD HGLTPDQVVA IASNGGKQAL ESIVAQLSRR DPALAALTND QLVALACLGG RPAPHSRKRK SHD
|
| |