| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00502 |
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| Symbol | |
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| ID | 6305347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1868461 |
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| End bp | 1871223 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642639117 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001912990 |
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| Protein GI | 188576061 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCGG TCGCCACAGT ACTTTCCGCC CTCAGCGCCG CCCCGCGGCA GCAAGAACGC
CTGCTGCGGT TGCATACCCC GCTTGGCCCC GACGTGCTGG TCGCCGAGAC GCTCGACGGC
CGCGAGTCGG TCGATGGCGG CGGCTTCCGT TTCGACGTGG GCGCACTATC GGCCAACGCC
GGCCTGCCGC TGGACGACCT GCTCGGCCGG CCGGTGCTGC TGGAACTGCT CACCGCCGAA
TCGCACACCG CGCTGCGCCC GTTCCACGGC CATGTCACCG CGTTCGAACG CCTCGGCAGC
AACGGCGGCC TGGCGCGCTA CCGGCTGGTG GTGGAGCCGT GGCTGGCGCT GCTGGCCCAG
CGCGTGGACA GCTACGTGTT CCAGGACATG AGCGTGGTGG AGATCGCCGA GAGCGTGTTC
GCCGACTACG CCGGGCAAGG CGCGCTGGCG CCGGCGTGGC GCTGGGAGCT GTCCGACCGC
AGCACGTACG CCAGGCGCAG CCTGACCACG CAATACGAAG AGACCGACTT CGCGTTCCTG
AGCCGGCTGC TGGCCGAGGA AGGCATCGCC TATTGGTTCG AGCACACCGG CGCGGCCGAC
AGCGCCACGC GCGGCACGCA CACGCTGGTG CTGTCGGACC ACAACGCCGC CTTCGCCGAC
CTGGGCACGG TGCGCTACCA CCGCACCGAC GTCACCGAGC AGCAGGACAG CGTGCAGCAG
TGGGTACAGG CACATCGCTG GCGCGCGACC AGTCTGTCGC GGGCCAGCTG GGACTACCGC
AGCCGCAGCC TGCGCCTGGC CGGCGCCGAC GCCACGCCGC TGGGCGACAT CGGTGCCGAG
GACGTGGACA CCGCCGGGCC GTACGGCTGG CAGGACAGCA TGCGCGGCCA GCGCCGCGCG
CAGCAGCAGT TCGATGCGCA GCAGGTGGCG GCGCAGACCA TCGAGGGCCA GGGGACCTGG
CGGCAACTGG CGCCGGGCAC GCGTTTCGGG CTGCGCCAGC ATGCGGGCGT GGCGGCCGAT
GCGGCGTTCC TGTGCCTGCA GGTGCGGCAC CAGGCGCGCA ACAACCTGGG CGCGGAGGTG
TTCGACGCGC TGGAGCAGGC GCTGGGCGCG GTGGCGGTGG CCGGCGCGCC GCTGCCGCCA
GCGCTGGCAG GCCTGAGCGG CGGGTATGCG CCGGCGCAGG ATGAGGCGGC GGTAGAGTTC
TACCGCAACC AGTTCACCGC CATACCGGCC ACCGCGACCT ACCGGCCGCA AACCGAGGAC
GGCCACGGCG TGCGCCTGCA TCCCAAGCCC ACGGTGGTCG GCACGCTGAG CGCGATCGTG
GTCAGCGACG GCGACCCGGT GCAGTCCGAC CGCGACCACC GGATCAAGGT GCAGTTCCCG
TTCCAGCGCG GGGCCGACGC CAGCAGCGCG CTGGCGCATC CGGGGGGCGA GGACAACGCG
CCGGGCAGCG CATCGGCGTG GACCTGGGTG CGGGTGATGA CGCCTTGGGC CGGCGACAAC
TGGGGCGGCG TGGTGCTGCC GCGCAAGGGC CAGGAAGTGC TGGTGGGGTT CCTGGAAGGG
GACATCGACC GGCCGGTGGT GATCGGCAGC GTGTACAACG GGCGCGGCCA GGACGACGCG
GCGCACAACC AGGTCGGCGG CGGCGGGGCC GGGGCCACCG GCAATGCGCC GGCGTGGTTC
CAGGGCAACG CGCACGGTGC GGTGTTCACC GGGTTCAAGA GCCAGGCGCT GGCGCAGAGC
CAGGACGGCA CCGGCGGCTA CCAGCAGCTG CGGCTGGACG ACACGCCCGG CCAGGGCCGC
GCGCAGCTGT CGACCACCCA GCACGCCAGC AGCTTGACCC TGGGCCACCT GAAGGGCGGC
CACGACAACC TGCGCGAAGG CGAGCGCGGG TACGGGGCGG ACCTGTCCAC GCAGGCCTAC
GGCGCGGTGC GCGCCGGCCA GGGCCTGCTG CTGAGCAGCG AGCCGGGCAA CACCCAACTG
GCCGCCACCG GCGCGCTGAG CCAACTGCAG CAGGGCAGCG ACCTGCTCAA GCGCCTCAAC
GACGCCGCCC GCACCCAGCA GGCGGGCCTA CCGAGCGAAC CGGAGTCCCT GCCGACCCAG
GACGGCCTGA AGACCTTGCA GGACCACCTG CAGGCCACCC ACAGCGGCAG CGCGGCCGGC
GCGATCGGCG GTGGCGCCGG CGAGGTGCCG GGCTGGAGCG CCCCAGTGCT GCTGGGCAGC
GGCCAGGCCG GCGTGATGAG CCTGACCCCC GCCGACCAGG TGTGGGTGTC GGGCACCCAG
ACCGCGCTGC TGGCCGGCAG CGCACTGAAC TGGCTGAGCC AGGGCCACCT GGTGCTGGCG
GTGGCCGGCG GGCTGGTGCT GTACACCCAG GGCAGCGACC CGGTCGCCGA CAGCCCCAAC
CAGGAGCGCG GCATCGCCCT GCACGCCGCG CAAGGCACGC TCAGCGCCCG CGCGCACAGG
AACACCGCCA CCCTGGCCGC CAAGACCCAG GTGCGCATCG TCAGCACCAC CGCCGACGTC
CAGCTCGCCG CGCCGACCAA GCACCTGCTG GCCACCGCGG CCGGCGCCTA CATCAAACTG
GACGGCGACG ACATCGAACT GGGCGCGCCG GGGGTGGTCG CGTTCAAGGG CGGGCAGCAG
GTGTTGACGG GGCCGCAGGG CAGCACCGCG TCGGTGTCCA TCCCGCAGAC GCAGTTCAAG
GGCTGCGATC CGACATTGGT CAATGCGCAG CTTCGCTCCG AAGCCGCCGC AGACCTAGGG
TGA
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| Protein sequence | MDPVATVLSA LSAAPRQQER LLRLHTPLGP DVLVAETLDG RESVDGGGFR FDVGALSANA
GLPLDDLLGR PVLLELLTAE SHTALRPFHG HVTAFERLGS NGGLARYRLV VEPWLALLAQ
RVDSYVFQDM SVVEIAESVF ADYAGQGALA PAWRWELSDR STYARRSLTT QYEETDFAFL
SRLLAEEGIA YWFEHTGAAD SATRGTHTLV LSDHNAAFAD LGTVRYHRTD VTEQQDSVQQ
WVQAHRWRAT SLSRASWDYR SRSLRLAGAD ATPLGDIGAE DVDTAGPYGW QDSMRGQRRA
QQQFDAQQVA AQTIEGQGTW RQLAPGTRFG LRQHAGVAAD AAFLCLQVRH QARNNLGAEV
FDALEQALGA VAVAGAPLPP ALAGLSGGYA PAQDEAAVEF YRNQFTAIPA TATYRPQTED
GHGVRLHPKP TVVGTLSAIV VSDGDPVQSD RDHRIKVQFP FQRGADASSA LAHPGGEDNA
PGSASAWTWV RVMTPWAGDN WGGVVLPRKG QEVLVGFLEG DIDRPVVIGS VYNGRGQDDA
AHNQVGGGGA GATGNAPAWF QGNAHGAVFT GFKSQALAQS QDGTGGYQQL RLDDTPGQGR
AQLSTTQHAS SLTLGHLKGG HDNLREGERG YGADLSTQAY GAVRAGQGLL LSSEPGNTQL
AATGALSQLQ QGSDLLKRLN DAARTQQAGL PSEPESLPTQ DGLKTLQDHL QATHSGSAAG
AIGGGAGEVP GWSAPVLLGS GQAGVMSLTP ADQVWVSGTQ TALLAGSALN WLSQGHLVLA
VAGGLVLYTQ GSDPVADSPN QERGIALHAA QGTLSARAHR NTATLAAKTQ VRIVSTTADV
QLAAPTKHLL ATAAGAYIKL DGDDIELGAP GVVAFKGGQQ VLTGPQGSTA SVSIPQTQFK
GCDPTLVNAQ LRSEAAADLG
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