Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00498 |
Symbol | |
ID | 6305351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1875772 |
End bp | 1878114 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642639121 |
Product | hypothetical protein |
Protein accession | YP_001912994 |
Protein GI | 188576065 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.10002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACCGA TCACGCCCAA GCAATGGATC GGCGCGCCGC AGGCCAAGGG CGACACGGTG CCGCTGTCCA GCGCCGAGGA TCTGAAGGTG GCGCTGGAAT ATCGCGCGTT CGCCGGCGAG GTCAGCGAGC CGGCGCAACT GCCGCACGAT CGCAAGCCGG CGGCGATCAG CACGTCCAGC GGCGGCTACA AGGCCGATGT GTTGCACGCC AACAGCACGC GCTACCCCTG GGCGCTGCGC ACCCATAGCA TGAGCGGCGC TTCGGCCGAG CAGGCGCTGC AGCAACGGTA TGCGCGCATG TGTGCGGCCA GCCACAACGG CAAACAGGGC GATCAGCGAC AGACCTACAT GCCGATGCTG CTGGGCCTGT GGGACGCGGT GGGCGTGGTG CACGAGCTCA ACGGCTACCG GCACGACGTG GTCGGGGCGA TGGCGCGTTA CAAGGAAGAG CGGGCGCTGG AATTCAACGC GATGGAGCAC ATCGAGCAGA TCGATACGCT GCTGCAGCGC AATGCGGCGG TGCTGTCGGA TCAGTATGCC CAGGCCAGTC GCGCGCGCAT GGAAGAGCTG GAGCAGGAAC ACTCCGGCGG CAATGCGCTC ACCCAATCGG GCATGGACGC GCTGCGCACG CACGGGATCG CCTCCTCCAA CGCGGGAACC TGGGACGGCT TGTCCAAGGC CTTGCTGCCG GTGTACCAGC GGCAGGCGCG GGAGAGCTGG GAAACGACGT ATCGGCCACG GATCGACGCG GCCGCGTACA CGGCGTTCAA GGCCAACGCG CAGCGGTTCG GTCAGGCGGC GATGGAGTTG CTGACGCAGC GCACGCAGGT GCTGGGCGCA TGGCTGTCCA ACCCGCTGTT CCTGGTCACG CTGGAGGACT ACGACGGCAC TTCGCCATCG TGCGGGGTGC GCTTCGAGGA GGTCATCACC CATGCGATCG AAGGGCTGGG CATGGACCCG GACGGTCGCC GGCTCCTGCA GGACCTGGCG GGCAATCTGG ATGTGACAAG CCGCAGCTGC CTGCTGTGGC GTGTGGTGGC GCAGAACCAG GATGAAGCCA GGGAGGAGCT GAAGCAGACG CTGAGCGAGG CAGATCAGCA AAAGAACATG GTCCTGTCGG CGGCCGGTGC CGGTTGGAGT GTGTTTGTCA CGACGAGCAA GACGCTGAAG AAGTTCTTGA GCGTCTACAA GGGCTTCGAA ACAGCGCAAA AGCAGGCGGC CCCGCTCACC GCCACGGACC GGATCTTGCG CGAAAGCGGC GTGGATCGGT TCGTGACCAC GGCCGGCGCG TTTTTGCTCA ATCGTTTCCC GCTCAACGGC GTGCAGGACA AGGTAGGCAA TGCGCTGGTG CGCTTCGTGC TGATGACGCG CGCGCTCTTG GATGAGGCCG AGGTCTCCAA GCTGATCAGC CAGGAGGCCA GCACGGGCGT TGCCGTGCGT AGCTATTTCA TGGAGCGGGT GGAGCACTAC CGCAGCCAGC CACTGACCAG CGGCACGCCC ATGCTGTACG CCCTGCGCGA CGTGGAACGG CACAAAGGCA CGGACCTGAT GCGCGAACGC TGGGCGCGCG CGGCCGAGAG CAGCCGCAAC GCGGTACGGC TGGGCGCGTT GACCGGCGTG CTGGAACTGG TGAACTGCAT CAACCTGCTG AGCAAAGCAG ACAAGCAGGC GCGCGACTAC GGCAGTCTGG TGGCCTCGGG CGTATCGCTG GTGTCGGTCT ACACCAGCAT GGCCGAAAAG GTGAGTAAAG AATTCTTCGG CGACGCCAGC CGCAGCATGT CCAGGATGAA GGCGATCGGT GGATGGCTGG GTGGGTTTGG TACGTATGTT GGGGTTTATT ATGATGCTGG GGACCTCTTT CTTAATCTAG ATAAGAAAGA TTATGGGGCA GCATTTATTT ATTTTACAAA GTCACTTTCA GGGGTTGCAG TAGGTGGCGC GCAGTTTCTT ACCGCGCTTG CTTATTCCGC CCCTGTTTTT GAGAAAGCTA TCGGTAGAAG AGGTGTGATT ATTTGGCTGG ATTCTCTCAA GGCAGGCTTA CAAGCAGCTG CTGCCAAAGA GGGGGAAGAG GTATTAGCTA AGGCAACAAT GAAACGGATA GGCATCGGAG TATTAAGGCT CGGCGGATGG CAAGTCACGG TTGCTTTAGT TGTCATGGAT GTGTTGATTT ATGCGCTAGA GCCAGACGCT CTTGAGAAAT GGTGCGAAAG CAATTGGTTC GGCAAAGTGA GTGAAGGGTG GATTCTAGGC TTTGGGGCCA GTAGACCGCA CTATAAAAAT TTAAAAGAGC AAGACGAGGC TTTTAAAAAG GCTATTGGTG AAGTCACGGC TCGCCCCAAC TGA
|
Protein sequence | MQPITPKQWI GAPQAKGDTV PLSSAEDLKV ALEYRAFAGE VSEPAQLPHD RKPAAISTSS GGYKADVLHA NSTRYPWALR THSMSGASAE QALQQRYARM CAASHNGKQG DQRQTYMPML LGLWDAVGVV HELNGYRHDV VGAMARYKEE RALEFNAMEH IEQIDTLLQR NAAVLSDQYA QASRARMEEL EQEHSGGNAL TQSGMDALRT HGIASSNAGT WDGLSKALLP VYQRQARESW ETTYRPRIDA AAYTAFKANA QRFGQAAMEL LTQRTQVLGA WLSNPLFLVT LEDYDGTSPS CGVRFEEVIT HAIEGLGMDP DGRRLLQDLA GNLDVTSRSC LLWRVVAQNQ DEAREELKQT LSEADQQKNM VLSAAGAGWS VFVTTSKTLK KFLSVYKGFE TAQKQAAPLT ATDRILRESG VDRFVTTAGA FLLNRFPLNG VQDKVGNALV RFVLMTRALL DEAEVSKLIS QEASTGVAVR SYFMERVEHY RSQPLTSGTP MLYALRDVER HKGTDLMRER WARAAESSRN AVRLGALTGV LELVNCINLL SKADKQARDY GSLVASGVSL VSVYTSMAEK VSKEFFGDAS RSMSRMKAIG GWLGGFGTYV GVYYDAGDLF LNLDKKDYGA AFIYFTKSLS GVAVGGAQFL TALAYSAPVF EKAIGRRGVI IWLDSLKAGL QAAAAKEGEE VLAKATMKRI GIGVLRLGGW QVTVALVVMD VLIYALEPDA LEKWCESNWF GKVSEGWILG FGASRPHYKN LKEQDEAFKK AIGEVTARPN
|
| |