Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00489 |
Symbol | |
ID | 6305360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1888124 |
End bp | 1889866 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642639129 |
Product | pts system fructose-specific eiibc component (eiibc-fru) (eii-fru) |
Protein accession | YP_001913002 |
Protein GI | 188576073 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCTT CCATCGTGGT CATCGCCGCT GGCGAACGCA GCACCGAAGC CGTCCTGGCG GCTGAAGCGC TGCGCCGCGC GGCCACCGCC GCCGGGCGCA GCGTGACGAT CGAAATCCGC AGCGACCAAG GCGTACTTGG CGCGCTACCG AGCGAGCTCG CCAGCGGTGC CACCCAGATC TTGGTGGTCG GCGACGCCGA TGCCGACACC GCCCGCTTTG GCGATGCGCA ACTGGTGCGC CTGAGCCTGG GTGCGGTGTT GGACGACCCG GCCGCCGCGC TGAACCAGCT CGCTGCACCC GCTGCCGCAA CCGCATCGAC CGGTGCAGGC GGCGAAAGTG CAAGCAGCAA GCGCATCGTC GCGATCACGT CTTGCCCCAC CGGCATCGCG CACACCTTCA TGGCTGCCGA AGGCCTGCAG CAGGCCGCCA AGAAACTCGG CTACCAGATG CGGGTGGAAA CCCAGGGCTC GGTGGGTGCG CAGGACGCAC TCACCGACGA TGAAATCCGC AATGCAGACG TCGTCATCAT TGCCGCCGAC CGCGAAGTGG ACCTGGCCCG CTTCGGCGGC AAGCGCGTGT TCAAGAGCGG CACCAAACCG GCGATCAACG ATGGCCCAGC GCTGATCAAC AAGGCCCTGG CCGACGCCAG CGTGCAGGGC GGCGCGACGC CGGCCACCGG CACAGCCGCC AGCGCCACGG CGAGCAAGGG CAATAGCCGC ACCGGTGCCT ACAAGCACCT GATGACCGGC GTCTCGTTCA TGCTGCCCTT CGTCACTGCC GGCGGCCTGC TGATTGCGTT GGCATTTGCG CTGGGCGGCA TCTACGCCGG CGACGATGCG CATCAAGGCA CGCTGGCCTG GTCGCTGTTC CAGATCGGCG CGAAGGCTGG CTTCACCCTG ATGGTGCCTG CCCTGGCTGG CTACATCGCC TACTCCATCG CCGACCGTCC CGGCATCGCG CCCGGCATGA TCGGCGGCTT GGTCGCGGCC AATCTCAACG CCGGCTTCCT CGGCGGGATC ATCGCCGGCT TCATCGCCGG CTACGGCGTG GCCGCGCTCA ACCGCTACAT CACGCTGCCG CGCAACCTGG AAGGACTCAA GCCGGTGCTG ATCCTGCCAG TGCTGGGCAC CCTGCTGGTC GGGCTGGCGA TGATGTACGT GTTCGGCCAG CCCGTGGCCG ACCTGCTGGC CTGGCTCACC GCCTGGCTGC GCGGCATGCA GGGCAGCAGC GCCTTGCTGC TGGGCTTGTT GCTCGGCGGC ATGATGGCGT TCGATATGGG CGGGCCGGTC AACAAGGCGG CCTATGCGTT TTCCACCGGC TTGATCGCCA GCCAGGTCTA CACCCCGATG GCCGCCGCCA TGGTGGCCGG CATGACCCCG CCGCTGGGCA TCGCGCTGGC GACCTGGGTG TTCCGCAACC GCTTCACCGC CGAAGAACGC GGTTCGGCCA CCGCGGCCGG CGTGCTTGGG CTGGCCTTCG TCACCGAAGG CGCCATCCCG TATGCCGCAC GCGACCCGCT GCGTACCATC CCGGCGCTGG TGATCGGCTC GGCCGTGGCC GGCGCGATCT CGATGACCGC CGGTGCCGAA TTGAAGGCGC CGCATGGCGG CATCTTCGTG CTGCTGATCC CCAACGCCGT CACCCACTTG CTCAATTACG TGCTGGCCCT GGTGGTCGGC GTGGTGGTCA CGGCGATCGC GCTGCGCCTG CTCAAGAAGC CGGTTGCCGA CGTCGTCGCC TGA
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Protein sequence | MSSSIVVIAA GERSTEAVLA AEALRRAATA AGRSVTIEIR SDQGVLGALP SELASGATQI LVVGDADADT ARFGDAQLVR LSLGAVLDDP AAALNQLAAP AAATASTGAG GESASSKRIV AITSCPTGIA HTFMAAEGLQ QAAKKLGYQM RVETQGSVGA QDALTDDEIR NADVVIIAAD REVDLARFGG KRVFKSGTKP AINDGPALIN KALADASVQG GATPATGTAA SATASKGNSR TGAYKHLMTG VSFMLPFVTA GGLLIALAFA LGGIYAGDDA HQGTLAWSLF QIGAKAGFTL MVPALAGYIA YSIADRPGIA PGMIGGLVAA NLNAGFLGGI IAGFIAGYGV AALNRYITLP RNLEGLKPVL ILPVLGTLLV GLAMMYVFGQ PVADLLAWLT AWLRGMQGSS ALLLGLLLGG MMAFDMGGPV NKAAYAFSTG LIASQVYTPM AAAMVAGMTP PLGIALATWV FRNRFTAEER GSATAAGVLG LAFVTEGAIP YAARDPLRTI PALVIGSAVA GAISMTAGAE LKAPHGGIFV LLIPNAVTHL LNYVLALVVG VVVTAIALRL LKKPVADVVA
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