| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00482 |
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| Symbol | |
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| ID | 6305368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1898114 |
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| End bp | 1901284 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642639137 |
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| Product | AcrB protein |
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| Protein accession | YP_001913010 |
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| Protein GI | 188576081 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.746584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAGT TTTTTATCGA ACACCCGGTC TTTGCGTGGG TGGTGGCGAT CCTGATCTCG
CTTGCGGGCG TGATCTCGAT CCTGAATCTG GGTATCGAGT CGTACCCGAC GATCGCCCCG
CCGCAGGTCA CCGTCACCGC CAACTTCCCC GGCGCCAGCG CCGACACCGC CGAAAAGGAG
GTGACCCAGG TCATCGAGCA GCAGCTCACC GGTATCGACC ACCTGCTGTA CTTCAACTCG
TCCTCGGCCG CCAACGGTCG CGTGACCATC ACCCTGACCT TCGAAACCGG CACCGACGCG
GATATTGCGC AGGTGCAGGT GCAGAACAAG GTGTCGTTGG CCGCACCGCG TCTGCCGTCG
GAAGTGACCC AGCAAGGTGT GGTGGTGGCC AAGGCCAACG CCGGCTTCCT GATGGTGGCT
GCGCTGCGCT CGGATAATCC GTCGATCAAC CGCGACGCGC TCAACGACAT CGTCGGCTCG
CGCTTGCTCG AGCAGATTTC GCGCGTGCCT GGCGTGGGCA GCACCAACCA GTTCGGCGCC
GAGTATGCGA TGAACATCTG GTTGAACCCG GAGAAGCTGC AGGGCTACAA CCTGTCGGCC
ACCCAGGTGC TGACCGCGGT GCGTAACCAG AACGTGCAGT TCGCTTCCGG TTCGGTGGGC
GCCGACCCGA CCCCGGAAGG CATCAGCTTC ACCGCCACGG TGTCGGCGGA AGGCCGCTTC
AGCTCGCCCG AGCAGTTCGA AAACATCATC CTGCGCACCG ATAACAACGG TGCCACCGTG
CGCTTGAAGG ACGTTGCACG CGTGACCGTG GGGCCGAGCA GCTACGGCTT CGACACCCAG
TACAACGGCA AGCCCACCGG CGCCTTCGGT ATCCAGCTGT TGCCGGGCGC CAACGCGTTG
AATGTGTCCG ACGCGGTCAG CGCCAAGCTC GACGAACTGC AGCCAACCTT CCCGCAAGGC
GTGACATGGT TTGCGCCGTA CGAATCGACC ACCTTCGTGC GCATCTCCAT CGAGGAAGTG
ATCCACACGC TGGTGGAAGC CATCGTGCTG GTGTTCCTGG TGATGCTGTT GTTCCTGCAG
AACTTCCGCG CCACCGTGAT TCCCACGCTG GTGATTCCGG TCGCGTTGCT GGGCACGTTC
TTCGGCATGT ACGTGATCGG CTTCACCATC AACCAACTGA CGCTGTTTGC GATGGTGCTG
GCGATCGGCA TCGTGGTGGA CGATGCGATC GTGGTGATCG AGAACGTCGA ACGCATCATG
AGCGAAGAGC ATCTGGAGCC GAAGGCGGCC ACCCAGAAGG CGATGACCCA GATCACCGGC
GCAGTGGTGG CCATCACCGT GGTGCTGGCG GCGGTGTTCA TCCCCTCCTC GCTGCAGCCC
GGCGCCTCGG GTGCGATCTA CAAGCAGTTC GCGTTGACCA TCGCCATGTC GATGGGCTTC
TCCGCCTTCC TCGCGTTGAG CTTCACCCCG GCGCTGTGCG GCGCGTTCCT CAAGTCGACC
CACTCCACCA AGAAGAACTG GGTCTACCGC ACCTTCGACA AGTACTACGA CAAGCTGGCG
CATCGCTATG TCGGCGTGGT CGGTCACACC CTCAAGCGCT CGCCGCCGTG GATGATCGCG
TTCGTGGCGC TGATGGTGCT GTGCGGCTTC CTGTTTACGC GGATGCCGGG CAGCTTCCTG
CCGGATGAAG ACCAGGGCTT TGCGGTGGCC ATCGTGCAGC TGCCGCCGGG CGCGACCAAG
ATCCGCACCA ACGAGGCGTT CGCGCAGATG CGTGCGGTAC TGGAGAAGCA GCCGGCGGTG
GAAGGCCTGC TGCAGATCGC CGGCTTCAGC TTCCTGGGCT CGGGCGAAAA CGTCGGCATG
GGCTTCATCC GGCTCAAGCC GTGGGACGAG CGTGACGTCA CGGCCGGGCA GTTGATCCAG
CAACTCAATG GCGCCTTCCA CAGCATCAAG GGCGCGCAGA TCTTCGTGGT CAACCTGCCC
ACCGTGCAGG GTCTGGGCCA GTTCGGCGGC TTCGACATGT GGCTGCAGGA CCGTTCCGGT
GCCGGCCAGG AAGCACTGAT CAATGCGCGC AACATCGTGC TCGGCAAGGC CGCGGAGAAG
CAGGACACCC TGGTGGGCGT GCGCCCGAAC GGTCTGGAAA ACGCGCCGCA GCTGCAGTTG
CATGTGGACC GCGTGCAGGC GCAATCGATG GGCCTGAATG TCAGCGACAT CTACAGCTCG
ATCCAGCTGA TGCTGGCGCC GGTGTACGTC AACGACTACT TCGCCGAGGG CCGCATCAAG
CGCGTCAACA TGCGCGCCGA CGATCAGTTC CGCGCCGGCC CCGAGTCGCT ACGCAACTTC
TTCACTCCCA GCACCACCGC CACCGGTACC GACGGCCAGC CGGCAATGAT TCCGCTGAGC
AACGTGGTCA AGGCCGAGTG GAACTACGCC TCGCCGGCGT TGAATCGCTA CAACGGCTAT
TCCGCCGTGA ACATCGTCGG CAACCCGGCC CCGGGCCGCA GTTCGGGCCA GGCGATGAGC
GCGATGGAAG AGATCGTCAA CAACGATCTG CCACCTGGCT TCGGCTTCGA CTGGAGCGGC
ATGTCGTACC AGGAAATCAT CGCCGGTAAT GCTGCCACGC TGTTGCTGGC GTTGTCGGTG
GTGGTGGTCT TCCTGTGCCT GGCCGCGCTT TATGAAAGCT GGTCGATTCC GGTGGCGGTG
CTGATGGTGG TGCCGATCGG CGTGTTGGGG GCGATCACCT TCTCGATGCT GCGCGGCTTG
CCGAACGATC TGTACTTCAA GATCGGCATG ATCACGGTGA TTGGTCTGGC CGCGAAGAAC
GCGATCCTGA TCGTGGAATT CGCCGTGGAG CAGCGTGCGG CGGGCAAGAG CCTGCGCGAG
GCCACCCTGG AAGCGGCGCA TCTGCGGTTC CGTCCGATCC TGATGACCTC GTTCGCGTTC
ATCCTCGGCG TGCTGCCGCT GGCCATCTCC ACCGGTGCCG GCGCCAATGC GCGCCATTCC
ATCGGTACCG GCGTGATCGG CGGCATGGTG TTCGCCACGG TGCTCGGCTT GATCTTCATC
CCGCTGTTCT TCGTGGTGGT GCGCCGCATG CTGGGCGAGA AGCTGGATGA GCAGTCCAAG
GACTATCTGG TTGCGCAGAA CGATGGTGGC ACCCACCACC CGGATCGCTG A
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| Protein sequence | MPKFFIEHPV FAWVVAILIS LAGVISILNL GIESYPTIAP PQVTVTANFP GASADTAEKE
VTQVIEQQLT GIDHLLYFNS SSAANGRVTI TLTFETGTDA DIAQVQVQNK VSLAAPRLPS
EVTQQGVVVA KANAGFLMVA ALRSDNPSIN RDALNDIVGS RLLEQISRVP GVGSTNQFGA
EYAMNIWLNP EKLQGYNLSA TQVLTAVRNQ NVQFASGSVG ADPTPEGISF TATVSAEGRF
SSPEQFENII LRTDNNGATV RLKDVARVTV GPSSYGFDTQ YNGKPTGAFG IQLLPGANAL
NVSDAVSAKL DELQPTFPQG VTWFAPYEST TFVRISIEEV IHTLVEAIVL VFLVMLLFLQ
NFRATVIPTL VIPVALLGTF FGMYVIGFTI NQLTLFAMVL AIGIVVDDAI VVIENVERIM
SEEHLEPKAA TQKAMTQITG AVVAITVVLA AVFIPSSLQP GASGAIYKQF ALTIAMSMGF
SAFLALSFTP ALCGAFLKST HSTKKNWVYR TFDKYYDKLA HRYVGVVGHT LKRSPPWMIA
FVALMVLCGF LFTRMPGSFL PDEDQGFAVA IVQLPPGATK IRTNEAFAQM RAVLEKQPAV
EGLLQIAGFS FLGSGENVGM GFIRLKPWDE RDVTAGQLIQ QLNGAFHSIK GAQIFVVNLP
TVQGLGQFGG FDMWLQDRSG AGQEALINAR NIVLGKAAEK QDTLVGVRPN GLENAPQLQL
HVDRVQAQSM GLNVSDIYSS IQLMLAPVYV NDYFAEGRIK RVNMRADDQF RAGPESLRNF
FTPSTTATGT DGQPAMIPLS NVVKAEWNYA SPALNRYNGY SAVNIVGNPA PGRSSGQAMS
AMEEIVNNDL PPGFGFDWSG MSYQEIIAGN AATLLLALSV VVVFLCLAAL YESWSIPVAV
LMVVPIGVLG AITFSMLRGL PNDLYFKIGM ITVIGLAAKN AILIVEFAVE QRAAGKSLRE
ATLEAAHLRF RPILMTSFAF ILGVLPLAIS TGAGANARHS IGTGVIGGMV FATVLGLIFI
PLFFVVVRRM LGEKLDEQSK DYLVAQNDGG THHPDR
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