Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00474 |
Symbol | |
ID | 6305377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1915390 |
End bp | 1916619 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642639146 |
Product | hypothetical protein |
Protein accession | YP_001913019 |
Protein GI | 188576090 |
COG category | [S] Function unknown |
COG ID | [COG2733] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.20187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTTGC TGCTGGCAAT GTTCGCTGGC TTCATCACCA GCCACCTGAT GGGCGAACAC GGCGTCTGGG CATGGGTGTC GGCCTTCTGC GAAGCGGCCA CGGTGGGCGC ATTGGCAGAC TGGTTTGCGG TGGTCGCACT GTTCCGACGC CCGATGGGCC TGCCGATTCC GCATACCGCC ATCCTGCCAC GCGGCAAGGA CCGGCTGGCC GACGGCCTGG CCGTGTTCGT GCGCGACCAG TTCCTCGCCC CCGATGCGTT GATGGAAAAA TTGCGTGTGT TCGATCCCGC CAGCCGCCTG GGCGATTGGT TGGCAAAACC CGAACAGGCA CGCATGCTGG CGCAGATGGC ACGCAGCTGG ATGCTGCAGG CGCTGGAACT CCTCGACGAA GCGGCAGTCC GCCGCGCGAT TCACGGCTTC GTGGTCGACC GCCTGCGCAA ATGGAATGCT GCCGCCACCA TCGGCGACAT CATGGCGCTG CTCACCACCG ACGGGCGCCA TCAAAAACTG CTGGATGAAG TATTACTGCG GCTGGGCGAA TGGCTGGATC AGGAACAGGT CAAGACGCGC GCCTCTGCAT TGATCGTGCG TTACGCGCAG CGCGAGTGGC CCAAGCTGGT CGGCACCGTG AACTGGGTCA AGCCGATCGA AGAGATCGGC GACAGTCTGG CCGACCGCAT GGCACGCGCG GCGATCGAAG AACTGCAGGA CCTCCTCAAG ACGCCCGAGC ACCCAATCAG GCTCGACTAT GAGGCGTGGT TGCAGGGCTA CATCACGCGG CTGCGCGATG AGCCGGAAAT GGCCGTACGC GTGGAAGAAC TCAAGCAACG CGCGATCGAA CATCCGGCAT TGCAGGAATA CGTGCAAGGT CTCTGGAGCG AAATTCGCGA TGCATTGCGC AACGACCTGG CGCGCGAGCA GTCGTCGATG GCCGCGCAGA TGGAACGTTC CATGCAATCG CTCGGCCAGG CCTTGTCGCA AGACCCCTCG CTACGCGAAG CACTCAATCA ACATATGTTG CAAGCGGCTG ATAAGCTCAC CACGCGCTTG CGCACATCGG TGACCGATCA CATTGCATCG ACGATGAAAA GTTGGGACGA ACGTCACCTC GTCGAACAAT TGGAATTGGG TGTGGGGCGC GATCTGCAAT ACATTCGCTT CAATGGAACG TTGGTCGGTG GGTTGATCGG GCTCATCCTT CACGCGTTGT CGATCTGGCT CTCGTTCTGA
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Protein sequence | MALLLAMFAG FITSHLMGEH GVWAWVSAFC EAATVGALAD WFAVVALFRR PMGLPIPHTA ILPRGKDRLA DGLAVFVRDQ FLAPDALMEK LRVFDPASRL GDWLAKPEQA RMLAQMARSW MLQALELLDE AAVRRAIHGF VVDRLRKWNA AATIGDIMAL LTTDGRHQKL LDEVLLRLGE WLDQEQVKTR ASALIVRYAQ REWPKLVGTV NWVKPIEEIG DSLADRMARA AIEELQDLLK TPEHPIRLDY EAWLQGYITR LRDEPEMAVR VEELKQRAIE HPALQEYVQG LWSEIRDALR NDLAREQSSM AAQMERSMQS LGQALSQDPS LREALNQHML QAADKLTTRL RTSVTDHIAS TMKSWDERHL VEQLELGVGR DLQYIRFNGT LVGGLIGLIL HALSIWLSF
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