Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00467 |
Symbol | |
ID | 6305385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1928473 |
End bp | 1929711 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639154 |
Product | metabolite transport protein |
Protein accession | YP_001913027 |
Protein GI | 188576098 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGCGTGC TGTTCGCCAG CCTGATCGGC ACCACCATCG AGTTCTTCGA TTTCTACATC TACGCCACTG CTGCGGTTCT GGTGTTTCCC ACGCTGTTCT TTCCCGCCGG TGATGGCAGT GCAGCGATGC TGCAGTCGTT GGCCACCTTC GCGGTGGCGT TCGTCGCGCG GCCGGTGGGC TCGGCGGTGT TCGGGCACTT CGGTGATCGG GTCGGGCGCA AGGCCACGCT GGTGGCAGCG CTGCTGACGA TGGGCCTGTC CACGGTGGCG ATCGGCCTGT TGCCCAGTTA CGCGCAGATC GGTGTGTTTG CGCCCGCGTT GTTGGCGTTA TGCCGCTTCG GCCAGGGGCT GGGCCTGGGC GGCGAATGGG GCGGGGCGGT GCTGCTGGCG ACCGAGAACG CGCCGCCTGG CAAGCGCGTG TGGTACGGCA TGTTTCCACA ACTGGGCGCG CCGCTGGGGT TTCTGTTGTC GACCGGCACC TTTCTGGGCA TGGGCGCAGT GCTGGACGAT ACGCAGTTCA TGCAGTGGGG CTGGCGCGTG CCGTTTTTGG CCAGTGCGTT GCTGGTGCTG ACCGGGCTAT GGGTGCGCTT GAGCATCACC GAGACGCCGG ATTTCCAGAA GACGCTGGAC CGCAAGACGC GCGTCACGTT GCCGCTGGGC ACGGTAGTCT TGCAGCATGG GCCGGCACTG GTCATCGGCA CGCTGGGCGC GTTCGCCACC TTCGTGCTGT TCTATCTGAT GACGGTGTTC GCCCTCGGCT ACGGCACCAA GACGCTGGGC TACGACAAGG AACAATTCCT GTTGTTGCAG ATGGCCGGCA TCGTGTTTTT TGTGCTGGGC ATTCCGCTCT CGGCCAAGTT TGGCGACCGC CATGGCGCGC CGCTGGCGAT GCTGCTGGCC AGCATTGCCA TCGTTGCCTT TGGCCTGGCA TTTGCGCCAC TGTTTCAGGC TAACCACCCG CTACAGGTGC TGGCGTTCCT GTCGCTGGGA TTTTTCTTCA TGGGGCTGAC CTACGGCCCC TGCGGCACAC TGCTGGCAGA GCTATATCCC ACTGAAGTGC GCTACACCGG CGCATCGCTG TCGTTCAATT TGGCCGGCAT CCTGGGCGCG GCACCTGCGC CGTACGTGGC CACGCAACTG GCGGCCCGCT ACGGCGTGCA GTCGGTGGGG TATTACCTGG GCGGTGCTGC GGTGCTGAGC CTGGTCGCGC TGGTGGTGGC GCGGCGGTGG CGCGGTTGA
|
Protein sequence | MRVLFASLIG TTIEFFDFYI YATAAVLVFP TLFFPAGDGS AAMLQSLATF AVAFVARPVG SAVFGHFGDR VGRKATLVAA LLTMGLSTVA IGLLPSYAQI GVFAPALLAL CRFGQGLGLG GEWGGAVLLA TENAPPGKRV WYGMFPQLGA PLGFLLSTGT FLGMGAVLDD TQFMQWGWRV PFLASALLVL TGLWVRLSIT ETPDFQKTLD RKTRVTLPLG TVVLQHGPAL VIGTLGAFAT FVLFYLMTVF ALGYGTKTLG YDKEQFLLLQ MAGIVFFVLG IPLSAKFGDR HGAPLAMLLA SIAIVAFGLA FAPLFQANHP LQVLAFLSLG FFFMGLTYGP CGTLLAELYP TEVRYTGASL SFNLAGILGA APAPYVATQL AARYGVQSVG YYLGGAAVLS LVALVVARRW RG
|
| |