| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00466 |
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| Symbol | |
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| ID | 6305387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1930019 |
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| End bp | 1931263 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642639156 |
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| Product | Putative two-component system regulatory protein with GGDEF domain |
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| Protein accession | YP_001913029 |
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| Protein GI | 188576100 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.6149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGTTGG TGGAGAATTC GCGCACGTTC ACCAGCATGC TGCGCGAAGC CATCGAGCAA
CGCGTGGAAC TTTCAGTCAC CGTCGTGTCG ACCCTGGCCG AAGCTGCGCG TGTGCTTGAC
GAAGAGGATG GCTGGTTTCT GGTCCTGACC GGCCTGGTGC TGGTCGACGG CGACCGCGAC
AAGGTCGTGG AATTCTTTCT CTCGCGCAAA CTGCCCACCG TGGTGGTCAG CGGCGTGTAC
GACGAAGACC TGCGTCAGCG CGTGCTACAG CAGCAGATCA TCGATTACGT ACTGAAAAAC
GCACCGGGCA GCATCGAATA CCTGGCCTGG CTGGTACAGC GTTTGGAGCG CAATCGCCGG
ATCGCCGCCC TGGTGGTGGA CGATTCGCTG TCGGCACGCA CCTATGCCGG CGCGCTGCTG
TCGATGTACG GCTACCGCGT GGTGCTGGCA GCCGACGGCC CTGCCGGGCT GGAAGCAATC
GAACGCGACC CGAGCATTCG CCTGACCATC GTCGACCAGG AAATGCCTGG CATGGATGGC
GTGGAATTTA CCCGCCGGCT ACGTGCGATC CGCTCGCGCG ACAAGGTGGC GCTGATCGGT
ATTTCCGGTA ACAGCGATTC GTCGCTGATC CCGCGCTTTT TGAAGAACGG CGCCAACGAT
TTCCTGCGCA AGCCGTTTTC GCGCGAAGAA TTCTTCTGCC GCGTGTCGCA GAACGTGGAC
CAGCTGGAAC TGATTGGCAC CCTGCAGGAT CTGGCTACCC GCGACTTCCT CACCGGCTTA
CCCAACCGGC GTTACTTTCT GGAACAAAGC CAGCGTGTCA TTACGAAACT GTTGTCGCAG
GACCAGACGG TGACTGCGGC GATGGTGGAT ATCGATCACT TCAAACACAT CAACGACACC
TGGGGCCACG ACGTTGGCGA CCAAGCGCTG CGTGCGGTGG CCGCTTCGGT CTCCGGGCAT
GCCCGGCCGC AGGACCTGGT GGCGCGCTTC GGCGGCGAAG AATTCTGTCT GCTGGTGCCC
GGCCTGGATG CGGCCAACGC CACCAGCTAT TTCGAGACGT TGCGCGAACG CATCAGCGCG
CTGCGCGTGC GCGTGGGCGA AGAGACGCTC AGCATGACGG TCAGCATCGG CGTGTGCATC
GCCAGCGAAA GCGACCAGTC GCTGCATTAC CTGTTGAACG AAGCAGACAA GTACCTGTAT
CTGGCCAAGG CCGGCGGCCG TAACCAGGTG CGTCTGGCAG GCTGA
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| Protein sequence | MLLVENSRTF TSMLREAIEQ RVELSVTVVS TLAEAARVLD EEDGWFLVLT GLVLVDGDRD
KVVEFFLSRK LPTVVVSGVY DEDLRQRVLQ QQIIDYVLKN APGSIEYLAW LVQRLERNRR
IAALVVDDSL SARTYAGALL SMYGYRVVLA ADGPAGLEAI ERDPSIRLTI VDQEMPGMDG
VEFTRRLRAI RSRDKVALIG ISGNSDSSLI PRFLKNGAND FLRKPFSREE FFCRVSQNVD
QLELIGTLQD LATRDFLTGL PNRRYFLEQS QRVITKLLSQ DQTVTAAMVD IDHFKHINDT
WGHDVGDQAL RAVAASVSGH ARPQDLVARF GGEEFCLLVP GLDAANATSY FETLRERISA
LRVRVGEETL SMTVSIGVCI ASESDQSLHY LLNEADKYLY LAKAGGRNQV RLAG
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