| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00460 |
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| Symbol | |
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| ID | 6305395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1939717 |
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| End bp | 1941303 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642639164 |
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| Product | transport protein |
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| Protein accession | YP_001913037 |
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| Protein GI | 188576108 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0564548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAG CGGCCGCCAC CGGCCCGCGT GCCGGCGGTA GCGCCCAGCG CGAGAAGGCC
GAGCTGGGCG CCTGGTTGGC GGTGCTGGCC GGCACCATCG GCTCGTTCAT GGCGACGCTG
GATATTTCCA TCGTCAATGC GGCATTGCCC ACCATCCAGG GCGAAGTCGG TGCCAGCGGC
ACCGAAGGCA CCTGGATCTC CACCGCCTAT CTGGTGGCCG AGATCATCAT GATTCCGCTG
ACCGGTTGGT TCGCGCGCAC GCTGGGCCTG CGTAACTTCC TGCTGATCTG TGCGGTGATG
TTCACTGCGT TCTCGGTGGT GTGCGGGCTG TCGACGTCGC TTTCGATGAT GATCATCGGC
CGCGTGGGGC AGGGGCTGGC TGGCGGCGCC TTGATTCCGA CCGCGCTGAC CATCGTCGCC
ACGCGGCTAC CGCCGAGCGA GCAGACCTTG GGCACCGCCC TGTTCGGCAT GACCGTGATC
ATGGGCCCGG TGATCGGCCC GCTGCTCGGC GGCTGGCTCA CCGAAAACGT CAGCTGGCAC
TACGCGTTTT TCATCAACGT GCCGATCTGC GTTGGCTTGG TCGCGCTGCT GCTGCTTGGC
CTCAAGCATG AAAAAGGCGA CTGGGCCGGA CTGCTCAATG CTGATTGGCT GGGCATCTAC
GGGCTGACCG CCGGTTTGGG CGGGTTGACC GTGGTGCTGG AAGAAGGCCA GCGCGAGCGT
TGGTTCGAAT CCAGCGAGAT CAATACGCTG AGCCTGATTG CGTTGAGCGG ATTCATCGCC
TTGGTGATCA GCCAGTTCCG GCGCCGGCCT CCGGTGATCC GTCTGTCGCC GCTGGTGCAG
CGCAGCTTCG GCGCGGTCTT CATCATGGTG ATGGCGGTGG GCATGATCCT GTTCGGCGTC
ATGTACATGA TTCCGCAGTT CCTGGCGGTG ATCTCGGGCT ACAACACCGA GCAGGCCGGG
TATGTGCTGC TGCTGTCCGG GCTGCCGACC GTGCTGCTGA TGCCGATGAT GCCCAAGCTG
CTGGAAATGG TGGACGTGCG CATCTTGGTG ATTGCCGGGT TGATCTGTTT TGCCGCTGCC
TGTTTCGTCA ATCTGACGCT GACCGCGGAC ACCGTGGGCA CGCATTTTGT CGCCGGGCAG
TTGCTGCAGG GCTGTGGCCT GGCGCTGGCA ATGATGTCGC TCAATCAGGC AGCGATTTCG
TCGGTGCCGC CGGAACTGGC GGGCGACGCC TCCGGCTTGT TCAACGCTGG CCGCAACCTG
GGAGGCTCGG TCGGTCTGGC GCTGATCTCC ACCTTTCAGG AGCGCCGCAT GACGTTCCAC
ATCGAAACCA TCGGCAGCGC CGTGACCGCC AATTCGTCGC GTGCGCAGGA TTTTCTGGCT
GGGATCACTG CACAGATGCA CGCCAGCGCC GGCGGCGAGG CCGCCATTCG CTCGGTCGCG
CAGCTGGCCC GGCTGGTGAA ACAGCAGGCC CTGGTGATGA CCTATAGCGA TCTGTTCTGG
ATCTTCGGCG TGATCGTGGT CTGCACGATT CCGCTGGCCT TTTTGCTCAA GCCGTTACCC
AAGGGGGCGC ACCTTGCAAT GCACTGA
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| Protein sequence | MSAAAATGPR AGGSAQREKA ELGAWLAVLA GTIGSFMATL DISIVNAALP TIQGEVGASG
TEGTWISTAY LVAEIIMIPL TGWFARTLGL RNFLLICAVM FTAFSVVCGL STSLSMMIIG
RVGQGLAGGA LIPTALTIVA TRLPPSEQTL GTALFGMTVI MGPVIGPLLG GWLTENVSWH
YAFFINVPIC VGLVALLLLG LKHEKGDWAG LLNADWLGIY GLTAGLGGLT VVLEEGQRER
WFESSEINTL SLIALSGFIA LVISQFRRRP PVIRLSPLVQ RSFGAVFIMV MAVGMILFGV
MYMIPQFLAV ISGYNTEQAG YVLLLSGLPT VLLMPMMPKL LEMVDVRILV IAGLICFAAA
CFVNLTLTAD TVGTHFVAGQ LLQGCGLALA MMSLNQAAIS SVPPELAGDA SGLFNAGRNL
GGSVGLALIS TFQERRMTFH IETIGSAVTA NSSRAQDFLA GITAQMHASA GGEAAIRSVA
QLARLVKQQA LVMTYSDLFW IFGVIVVCTI PLAFLLKPLP KGAHLAMH
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