Gene PXO_00418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00418 
Symbol 
ID6305440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1979321 
End bp1980991 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content67% 
IMG OID642639209 
Producthypothetical protein 
Protein accessionYP_001913081 
Protein GI188576152 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.56953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTTGG GCGATGAGCC GTTGGCGCAG GTGCGCAAGC GCGCCGAACA GGCATTGCAG 
GAAGACCGCC TGTATCGCGA TGCCAACGAT GCAATTCCGT TGTATCTGGC GATTCAGCAG
CGTGCCGGTG GCAAGGATGT CGCCAGCCGT CGCGGCCTGG AGCAGGCACG CGGCCGGTTG
CTCGAACGTG GCGCGGCGTT GATCCAACAG ACCGAGGGTC AGGACGATAC GTTGGAGCAG
GCGCGCGAAG TGGCCATTGT CGCGCTCGCC CTCGCACCAC AAGACCCCAA GGTGCGTGCC
CTGCAACGCG AAGTGGAAAC CGCGCAGCGT GTATTGGCGT TCAATCGCGC TGGCGAAGAA
GACCTGCGCG GCGGACGGCT CGGCGAAGAC GGCAATGGCG CGCTGGTGAA TTTTCGCGAT
GCTGCGCACC TGGACCCGGA CAACCCGCGC ACCCGGCAGG GCCTGGCCGC CGTGGAAAGC
GGTCTGCTGG AGCGCGCCGA ACAGGCGGCA CAGGCAAGCG ACTACATCGG TGCCCATTAC
TGGCTGCAGA TGGCAGGGCA GGTGCGCGAG CGTGCGCCCA CCATTGCCGA TGCGCGCGCG
CAGGTGGAGC GTATGCGCCG CGCGCACATT GCCGCCTTGC ATGATGCCGG TTTGCACGAT
CTGACCTCGC CGCGCGGGCT CAAGGCAGCC GGCGAAAAAC TTGCCGAAGT GCTGCGCATC
GCCGACCCCG GCGACCCGCT GGCTGGCGAT CTGCGTCGCC GCCTGGAGCT GGCCACGCAC
TACGGCAGCT TCCGTCCCGG ACAGGTGTTC ACGGACGGAC TCAAGGTCGG CGGGCGCGGC
CCACAGATGA TCGTAGTGCC GCATGGCGCA TTTCAGATGG GGCCCGGCGA TGCCGAACCG
GGCGCATCCG ACAACGAGCG CCCGGCACAT TACGTGCGCT TCGCGCGCGG CTTTGCGTTG
TCGATCACCG AGGTCACGGT CGCCGAGTTC GGTCGGTTCG TCCAGGCCAC CGATGCGCGC
CCGCGTGCCA CCCGGCGCGG GCATTCGGTG GTGTACGACG AGCGCAGTGG TAACTTTATC
CGCCGCAGCG GCGTGGATTG GCAATCCGAT TACAACGGCG CCCAGGCCGC ACCCAACAGC
CCGGTGATGC ACGTGAGCAT TCGTGACGCC GAAGCGTACG CATCCTGGCT GTCGGAACAG
ACAGGCCGCC ATTACCACGT GCCCAGCGAG GCCGAGTTCG AATACGCCAT GCGTGCCGGC
ACCACCGGGC GCTACCCGTG GGGCAATGCG GGCTCGCCTC CGGCCAATGC CGGCAACTTC
ACTGGCGGCA ACGACGTCTC GCGCAGCGGC CGACACTGGA ACAACGGGTT CGTCGGCTAC
GGCGACGGAT TCTGGGGTCC GGCGCCGGTC GGCAGCTTTC GCGCTAACGC CTGGGGTCTG
CACGACATGG GCGGCAACCT GAGCGAATGG GTGGCCGACT GCTGGCACGC CAGCTACCGT
CGTGCGCCAG CCGATGGCGC TGCCTGGTAC AACCCGGGTT GCCGGCAGCG CATGATCCGC
GGCGGCAGTT GGGCCAATTC GCCGCAACAG ACACGCGCGG CCTGGCGGCA GTCGCAGGAT
TCGGACACCA CCAGTGCGCG TATCGGCTTC CGCCTGGCGC GTGGAATATA G
 
Protein sequence
MELGDEPLAQ VRKRAEQALQ EDRLYRDAND AIPLYLAIQQ RAGGKDVASR RGLEQARGRL 
LERGAALIQQ TEGQDDTLEQ AREVAIVALA LAPQDPKVRA LQREVETAQR VLAFNRAGEE
DLRGGRLGED GNGALVNFRD AAHLDPDNPR TRQGLAAVES GLLERAEQAA QASDYIGAHY
WLQMAGQVRE RAPTIADARA QVERMRRAHI AALHDAGLHD LTSPRGLKAA GEKLAEVLRI
ADPGDPLAGD LRRRLELATH YGSFRPGQVF TDGLKVGGRG PQMIVVPHGA FQMGPGDAEP
GASDNERPAH YVRFARGFAL SITEVTVAEF GRFVQATDAR PRATRRGHSV VYDERSGNFI
RRSGVDWQSD YNGAQAAPNS PVMHVSIRDA EAYASWLSEQ TGRHYHVPSE AEFEYAMRAG
TTGRYPWGNA GSPPANAGNF TGGNDVSRSG RHWNNGFVGY GDGFWGPAPV GSFRANAWGL
HDMGGNLSEW VADCWHASYR RAPADGAAWY NPGCRQRMIR GGSWANSPQQ TRAAWRQSQD
SDTTSARIGF RLARGI