Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00389 |
Symbol | sodM |
ID | 6305470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2012387 |
End bp | 2012998 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642639239 |
Product | superoxide dismutase |
Protein accession | YP_001913111 |
Protein GI | 188576182 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.283594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTACA CCCTTCCGCA GTTGCCCTAC GCCTACGACG CGCTGGAACC GAACATCGAT GCGCAGACGA TGGAAATCCA TCACACCAAG CATCATCAGA CCTACATCAA CAACGTCAAT GCGGCGCTGG AAGGGACTGA GTACGCCGAT CTGCCGATCG AAGAGCTGGT CTCCAAGCTG AAGAGCCTGC CGGAAAACCT GCAGGGCCCG GTGCGCAACA ACGGTGGCGG CCACGCCAAC CATTCGCTGT TCTGGACCGT GTTGTCGCCC AACGGCGGCG GCGAGCCCAA GGGCGAGGTC GCCAAGGCGA TCGACAAGGA CATCGGTGGG TTCGAGAAGT TCAAGGAAGC GTTCACCAAG GCCGCCGTCA GCCGTTTCGG CTCGGGTTGG GCATGGTTGA GCGTGACCCC GGACAAGAAG CTGGTGGTGG AAAGCACCGC CAACCAGGAC AGCCCGCTGT TCGAAGGCAA TACCCCGATC CTGGGCCTGG ACGTGTGGGA ACACGCGTAT TATCTGAAGT ATCAGAACCG CCGCCCGGAA TACATCGGCG CGTTCTACAA CGCCGTCAAC TGGGAAGAAG TCGAGCGCCG CTACCACGCT GCGATCGCCT GA
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Protein sequence | MAYTLPQLPY AYDALEPNID AQTMEIHHTK HHQTYINNVN AALEGTEYAD LPIEELVSKL KSLPENLQGP VRNNGGGHAN HSLFWTVLSP NGGGEPKGEV AKAIDKDIGG FEKFKEAFTK AAVSRFGSGW AWLSVTPDKK LVVESTANQD SPLFEGNTPI LGLDVWEHAY YLKYQNRRPE YIGAFYNAVN WEEVERRYHA AIA
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