Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00263 |
Symbol | impE |
ID | 6305093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1595192 |
End bp | 1596025 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642638864 |
Product | ImpE protein |
Protein accession | YP_001912740 |
Protein GI | 188575811 |
COG category | [R] General function prediction only |
COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTG TCCATCCCGA ACATGCCTGC GCCCGCCTGC TCAAGGCGGG CGACCCGGCG CAATCGTTGG CCACCGCCAA GGACTGGGTG CGGCAGTGCC CGGCCGATGC CCAAGCGCGC ATCGGGCTGT TCCAACTGTT GGCGGTGGCC GGAGAGTGGC AGCGCGCGCA ACAACAATTG CGCCTGGCCG CGGAGTTGGA CCAGGGTTGG GGCGGGGTCG TGGCTGCGTA TGTGCGCATC CTCGACGCTG AACTGGAACG CGAACAGGTG CTGGCCGGCC GAATGATGCC GCTGATGCCT GGTCAGGTCC CGCCGTGGCA GCAGGATCTG CTGCAGGCAT TGCAGCATGA TCGCGACGGC GAACCAGGGC AGGCAGCGCG ACGGCGTGCC CTGGCGCTTA CGCAAGCCGA TGCCATCGCT GGCCATATCG ATGGCCGGCG TTTCGACTGG CTGGCCGACG CCGACCCGCG TTTTGGTCCG TGCCTTGAGG TCATCCTCGA AGTGGGCTAC GCGTGGGTGC CGTTCGTCCA ATTGCGCAGC CTGTGCTTGG AAGCCCCGAC CACGCTGCGC GACTTGCTAT GGCAGTCGGT CGACATCCAA TGGCATGACG GCACACGCAG CCGTGGCGTG GTGCCGTGCC GTTACCCCGG TAGCCAACAC AGCGAGCAGG GCGCGATCCG CCTTGGCCAG CGCACCGAAT GGAAGGGCGA GGCGTTGTCC GCATGCGGTC TGGGGCAACG CTTGCTGGCT GGCAGCGAGG ACGACTACCC GGTGCTCGAC ATCCGCCACA TCGCATTCGA CACCGCCGCG GTGGAAGCGC CATGGCCGAA CTGA
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Protein sequence | MSAVHPEHAC ARLLKAGDPA QSLATAKDWV RQCPADAQAR IGLFQLLAVA GEWQRAQQQL RLAAELDQGW GGVVAAYVRI LDAELEREQV LAGRMMPLMP GQVPPWQQDL LQALQHDRDG EPGQAARRRA LALTQADAIA GHIDGRRFDW LADADPRFGP CLEVILEVGY AWVPFVQLRS LCLEAPTTLR DLLWQSVDIQ WHDGTRSRGV VPCRYPGSQH SEQGAIRLGQ RTEWKGEALS ACGLGQRLLA GSEDDYPVLD IRHIAFDTAA VEAPWPN
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