Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00238 |
Symbol | |
ID | 6305116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1626593 |
End bp | 1627378 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642638887 |
Product | transposase, Mutator family |
Protein accession | YP_001912763 |
Protein GI | 188575834 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCGATG CCGTGGTCGA TGAGGTGAAG GCCTGGCAGA GCCGGGCGCT GGATCCGGTG TACCTGATCG TCTCCATCGA CTGCATTCAC GTCAAAGTAC GCGAGGGCGC GGTGCGGGTG AAGGCGGTCT ACCTGGCCAT CGGCATCACG ATGGCTGGCC AAAAGGAGGT GCTGGGCCTG TGGCTGGCCC AGACCGAGGG TGCGAAGTTC TGGATGCAGG TGGTGACGGA GCCGCGCAAC CGCGGCGTGC AGGACATCTT CATCGCCTGC GTCGACGGCC TGAAGGGCTT CCCCGAAGCG ATTGAGGCGG TGTTCCCACA GACGACGGTG CAGCTGTGCA TCGTGCACAT GGTGCGGAAC AGCTTGAACT ACGTGTCGTG GAAGCGGCGT CCGGAGGTGG CGGCCGCCCT CAAGCGCATC GACACCTGCG CCACCGCCGA GGAGGCCGAG CTGCGGTTTA CCGAGTTCCA GGAGCGCTGG GACGACGCGT ATGCGCCGAT CGGTCAGTCA TGGCGGCGCA ACTGGCCGTG CCTGGTCCCG TTCTTCGACT ACCCACCGCA GATCCGCAAG GTGATCTACA CCGCCAACGC CATCGAGTCG GTGCACTACG GCCTGCGCAG GCTGACCAAG CACCGCGGTG CCTTCCCCAG CGATGAGGCG CTGATCAAGC TGCTCTCCCT GGCCCTGCGC AACATCAGCA AGCGGTGGAC GTTGCCCATC CGCGATTGGA AGGCCGCGCT TAACCGCTTT ACCATCCAGT TCGAGGAGCG TATCCCTCAG CTGTAA
|
Protein sequence | MTDAVVDEVK AWQSRALDPV YLIVSIDCIH VKVREGAVRV KAVYLAIGIT MAGQKEVLGL WLAQTEGAKF WMQVVTEPRN RGVQDIFIAC VDGLKGFPEA IEAVFPQTTV QLCIVHMVRN SLNYVSWKRR PEVAAALKRI DTCATAEEAE LRFTEFQERW DDAYAPIGQS WRRNWPCLVP FFDYPPQIRK VIYTANAIES VHYGLRRLTK HRGAFPSDEA LIKLLSLALR NISKRWTLPI RDWKAALNRF TIQFEERIPQ L
|
| |