| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00183 |
|---|
| Symbol | |
|---|
| ID | 6305169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1690055 |
|---|
| End bp | 1691362 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638940 |
|---|
| Product | hemolysin |
|---|
| Protein accession | YP_001912816 |
|---|
| Protein GI | 188575887 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.702411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGAACG GCTTCTTCGC CATGTCGGAG ATGTCGTTGA TGACCTCGCG CAAGAGCCGC
CTGAAGCAGA TGGCCGGCTC GAGCAAACGC GCTGCGCGGG CCCTGGCATT GGCCGAAAGC
CCGGAAAACT TTTTGTCCAC GGTGCAGATC GGTATCACCC TGATCGGCAT CCTGACCGGC
GTGTTCGGGG GCGAAGCGAT CGGTGAGGCC ATCGCCAGCT GGCTGCAGGG CGTGTTCCCG
GCCCTGGCGG CCTCGTTCGA ACTGGTCGGC AAGCCGCGTC CGTATTCGGT CGTCATCGGC
AGCACCCTGG CAGTGGCGCT GATCACCTTC CTGACGCTGA TCTTCGGCGA GCTGGTGCCC
AAGCGGCTGG CGCTGCGCAA TTCCGAAGAC GTCGCAGGGG TGGTCGCAGT ACCGATGGGC
TGGCTGGCCA AGATTGCCGC GCCCGGCGTG TGGGTGCTGG CGCGCTCCAC CCGGCTGGTG
TTGCGCATGT TGGGCATGGG CAAGAACGAG TCGGCATCGA TCACCGAAGA AGAGATCCGC
ATGCTGGTGG CCGAAAGCCA CGAGGCCGGG GTGATCGACG CCCACGAGCG CGACATGATG
AATCGCGTGA TGCGGCTGGG CGACCGCACC GCCGACAGCC TGATGACCCC GCGCAACCGC
ATCGCCTGGC TGGACGCCAA CGCCGAGCCG GAACGCAATC TGCAGGTGAT GCGCGAGCAC
GAATTTTCGC GCTACCCGGT CTACCGCGGC AGCGACCAGG ACATTGCAGG CGTGCTGGAA
GTCAAATCGC TGGTCACGCG CATGGGCGGG CACGGCGAGA ATCTCTTCCA GGCGCTGCGC
GACACGTTAT TCGTGTCCGA ATCCACGCAT GCGATGAAGC TGCTGGAAAT CTTTCGCGAA
GAACAGCAGT CGATGGCACT GGTGGTCGAC GAATATGGCG AGATCCGCGG ATTGGTGACC
ATCAGCGACC TGATGGGCGC GGTGGTCGGC CGTTTGCAGG CGGTGGAAAA CACCGACGAA
GATGCGCTGG TGATCACGCG CGCCGACGGC TCGCTGCTGA TCGACGGCTC GCTGCCGGTG
GAAGAACTCC GCGAAGTGCT GGGCGCCGAT TTGCCGGACG CCGACGAAGG CGATTACCAC
ACGCTTGCGG GCCTGTGCAT TTATTACTTC GGGCGCATTC CGCAGGCCGG TGAATTCTTC
GATTGGGCCG GTTGGCGCAT CGAAATCGTC GACCTGGATG GTGCGCGCGT GGATAAGTTG
CTGTTGAGCC GAGTGGGCGA CGAGGACAGC GATGACATCG TCGGATGA
|
|---|
| Protein sequence | MLNGFFAMSE MSLMTSRKSR LKQMAGSSKR AARALALAES PENFLSTVQI GITLIGILTG
VFGGEAIGEA IASWLQGVFP ALAASFELVG KPRPYSVVIG STLAVALITF LTLIFGELVP
KRLALRNSED VAGVVAVPMG WLAKIAAPGV WVLARSTRLV LRMLGMGKNE SASITEEEIR
MLVAESHEAG VIDAHERDMM NRVMRLGDRT ADSLMTPRNR IAWLDANAEP ERNLQVMREH
EFSRYPVYRG SDQDIAGVLE VKSLVTRMGG HGENLFQALR DTLFVSESTH AMKLLEIFRE
EQQSMALVVD EYGEIRGLVT ISDLMGAVVG RLQAVENTDE DALVITRADG SLLIDGSLPV
EELREVLGAD LPDADEGDYH TLAGLCIYYF GRIPQAGEFF DWAGWRIEIV DLDGARVDKL
LLSRVGDEDS DDIVG
|
|---|
| |