Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00177 |
Symbol | parE |
ID | 6305175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1697066 |
End bp | 1698955 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642638946 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_001912822 |
Protein GI | 188575893 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.771486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCC GTTATAACGC CGCCGACATT GAAGTGCTGT CGGGCCTGGA CCCGGTCAAA CGCCGTCCTG GCATGTACAC CGACACCGCG CGCCCGAACC ATCTGGCGCA GGAAGTGATC GACAACTCGG TCGACGAGGC GCTGGCCGGT CACGCCAAGC AGATCGAAGT CACCTTGTAC AAGGACGGCA GCTGCGAGGT GTCCGACGAC GGCCGCGGCA TGCCGGTGGA CATCCATCCG GAAGAGAAGA TTCCGGGTGT GGAGTTGATC CTGACCCGGC TGCATGCCGG CGGCAAGTTC AACAACCGCA ATTACACCTT CTCCGGCGGC CTGCATGGCG TGGGTGTGAG CGTGGTCAAT GCGTTGTCGA CCAAGGTCGA GCTGTTCATC AAGCGCGAAG GCAGCGAACA CCGCATGGAG TTCCGCGACG GCAATGCCGC GTCCAAGCTG GAAGTGGTCG GCACGGTCGG CAAGAAAAAC ACCGGCACGC GGCTGCGTTT CTGGGCCGAC CCCAAGTATT TCGATACGCC CAAATTCAAC GTGCGTGCGC TGCGGCATCT GCTGCGCGCC AAGGCGGTGC TGTGCCCCGG CCTGACCGTG AAGCTGCACG ACGAAGCCAC CGGCGAGCAG GACAGCTGGT ATTTCGAAAA CGGCCTGCGC GATTACCTCA AAGGCGAGAT GGCCGAGCAC GAGATGCTGC CGGCCGACCT GTTCGTCGGT AGCCTGAAAA AAGACACCGA AATCGTCGAC TGGGCCGCAG GCTGGGTGCC GGAAGGCGAG CTGGTGCAGG AAAGCTACGT CAACCTGATC CCCACCGCGC AGCACGGCAC CCACGTCAAC GGCCTGCGGT CGGGCCTGAC CGATGCGCTG CGCGAGTTCT GCGATTTCCG CAATCTGCTG CCACGCGGCG TCAAGCTGGC GCCGGAAGAC GTGTGGGACC GGGTCACCTT CGTGCTCAGC CTGAAGATGA CCGACCCGCA ATTCTCCGGG CAGACCAAGG AACGCCTGTC CTCGCGTCAG GCCGCCGGCT TCATCGAAGG TGCTGCGCAC GATGCCTTCA GCCTGTATCT GAATCAGAAC GTGGAAATCG GCGAGAAGAT CGCGCAGATC GCCATCGACC GCGCCAGCGC ACGGTTGAAG ACCGAGAAGC AGATCGTCCG CAAGAAGGTC ACCCAGGGCC CGGCCCTGCC CGGCAAGCTG GCCGATTGCA TCAGCCAGGA TCTGTCCCGT ACCGAATTGT TCCTGGTCGA AGGCGATTCG GCCGGTGGCT CGGCCAAGCA GGCGCGCGAC AAGGACTTCC AGGCGATCCT GCCGCTGCGT GGCAAGATCC TCAATACCTG GGAAGTGGCT TCCGGCAGCG TGCTGGCCTC CGAAGAAGTG CATAACTTGG CGATCGCGAT CGGCTGCGAC CCGGGCAAGG ACGACATCAC CGGGCTGCGC TACGGCAAGG TGGTGATCCT GGCCGACGCC GACTCCGACG GCCTGCATAT CGCCACGCTG CTGACGGCGC TGTTCCTGCA GCACTTCCCC GCGCTGGTGG CCGCCGGCCA CGTGTTCGTG GCGATGCCGC CGCTGTTCCG CGTGGACGTG GGCAAGCAGG TGTTCTACGC GCTGGACGAA GAAGAAAAGA CCACGCTGCT GGACAAGATC GCGCGCGAGA AGATGAAGGG CCAGATCAGC GTCACCCGCT TCAAGGGCCT GGGCGAAATG AATCCGCAGC AGCTGCGCGA ATCCACCATC CACCCGGACA CACGACGGCT GGTGCAGCTG ACCATCGATG ATGGCGAGCA GACGCGTTTG TTGATGGACA TGCTGCTGGC CAAGAAGCGC GCAAGCGACC GCAAGCAGTG GCTGGAAACC AAGGGCGATC TGGCTTCGCT GGAAGTTTGA
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Protein sequence | MNTRYNAADI EVLSGLDPVK RRPGMYTDTA RPNHLAQEVI DNSVDEALAG HAKQIEVTLY KDGSCEVSDD GRGMPVDIHP EEKIPGVELI LTRLHAGGKF NNRNYTFSGG LHGVGVSVVN ALSTKVELFI KREGSEHRME FRDGNAASKL EVVGTVGKKN TGTRLRFWAD PKYFDTPKFN VRALRHLLRA KAVLCPGLTV KLHDEATGEQ DSWYFENGLR DYLKGEMAEH EMLPADLFVG SLKKDTEIVD WAAGWVPEGE LVQESYVNLI PTAQHGTHVN GLRSGLTDAL REFCDFRNLL PRGVKLAPED VWDRVTFVLS LKMTDPQFSG QTKERLSSRQ AAGFIEGAAH DAFSLYLNQN VEIGEKIAQI AIDRASARLK TEKQIVRKKV TQGPALPGKL ADCISQDLSR TELFLVEGDS AGGSAKQARD KDFQAILPLR GKILNTWEVA SGSVLASEEV HNLAIAIGCD PGKDDITGLR YGKVVILADA DSDGLHIATL LTALFLQHFP ALVAAGHVFV AMPPLFRVDV GKQVFYALDE EEKTTLLDKI AREKMKGQIS VTRFKGLGEM NPQQLRESTI HPDTRRLVQL TIDDGEQTRL LMDMLLAKKR ASDRKQWLET KGDLASLEV
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