Gene PXO_00162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00162 
Symbol 
ID6305190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1710296 
End bp1711087 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID642638961 
Productlipoprotein 
Protein accessionYP_001912837 
Protein GI188575908 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.989449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGACA ACGAACGGAT GAGCAAGACG CAGATGAATT CGGTACGCAA GACAGCAGTC 
ATGCTCGCAG TGGCCATTGG GCTCACCGCC TGCAGCAGCG CCACGGTGGT GCGTTCGCCT
GGGGCGAGTG GTGGTTCGTC GTCGCGTCCA AGCACGGCGC CACGCCCGTC GCTGCCACGC
CCGGGTGCCA CGGTGACCGT CCAGCGCGGC GATACCCTGT ATGCGATCTC GCGCCGGACC
AATATCACTG CCGCGGACCT GGCAGCCTGG AACGGCCTGT CGTCGCCGAA TACCATCTAT
CCCGGCCAGA CCCTCAAGCT GTATCCCGAC GGGGCGAGCA AGCCCGGCAG CAGTGCGCCG
GTTGCCGGCA GCGTGGCTCC GCCGCGTCCG GCTGCGCCGA TCGCCGCACC GGTCAGCAGT
GGATTCTCCT GGCGTTGGCC GGCCGATGGC GTGGTCGTCG GCACCTTCGT CACTGGCGAA
ACCACCAGGC AGGGCGTGGA CATCGCCGGT GCCAGCGGCC AGGCCGTGCG CGCGGCCGCT
GACGGCGTGG TGGTGTATTC CGGTGCCGGC CTGGTCGGTT ACGGCGAGCT GATCATCATC
AAGCACAACG ACCAGTGGCT ATCCGCGTAC GGGCACAACC GCAAGCGTTT GCTGAACGAA
GGCCAGAGCG TCAAGGCCGG GCAGCAGATT GCAGAAATGG GCCGCAGCGG TGCTTCCCGC
GACATGCTGC ACTTCGAGAT CCGCTACAAC GGCAAGCCAG TGGATCCGTT GCTGTATTTG
CCCAAGAAAT GA
 
Protein sequence
MEDNERMSKT QMNSVRKTAV MLAVAIGLTA CSSATVVRSP GASGGSSSRP STAPRPSLPR 
PGATVTVQRG DTLYAISRRT NITAADLAAW NGLSSPNTIY PGQTLKLYPD GASKPGSSAP
VAGSVAPPRP AAPIAAPVSS GFSWRWPADG VVVGTFVTGE TTRQGVDIAG ASGQAVRAAA
DGVVVYSGAG LVGYGELIII KHNDQWLSAY GHNRKRLLNE GQSVKAGQQI AEMGRSGASR
DMLHFEIRYN GKPVDPLLYL PKK