Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00093 |
Symbol | |
ID | 6305261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1766814 |
End bp | 1768067 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639032 |
Product | valine-pyruvate aminotransferase |
Protein accession | YP_001912905 |
Protein GI | 188575976 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.947467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCGC TGCACAGCGC CGCAGCCGCT GGCGTTCGCT ATGCTTGCGC CATGACAACC TCCTTCCAGA TCTCCCGACG TGCGCAGGCG CTGACCAGTT CGGCGATTCG CGAAATCCTT AAAGTGACCG AGCGGCCGGA GGTGATTTCC TTCGCCGGCG GGTTACCGTC GCCAGCCACG TTTCCGGTGG AGCGCATGCG CGCGGCCAGC GACCAGGTGC TGCGCGATGC GCCACAGGCG GCCTTGCAAT ACGGCCCCAC CGAAGGCTTC GCGCCGCTGC GCGAGTGGGT GGCCGCGCGG CTGAGTCGCG ATGGCGCCAG CATCCGGCCC AGCCAGGTGC TGATCACCAC GGGTTCGCAA CAGGGCCTGG ATCTGCTCGG CAAGCTCTTT ATCGATGAAG GCAGCAAGGT GCTGGTGGAA ACGCCGAGCT ATCTGGGTGC ACTGCAGGCG TTTTCGTTGT TCCAGCCAGG CTTCGTCGGC ATGCCCTCGG ACGAGGACGG TGTTGTGGTG GACGCGCTGG ATCCGGCGCT GCTGGCCGAT GCGCGCTTTC TGTACTGCCT GCCGAATTTT CAGAATCCCA CCGGCCGGCG CTTGCCGTTG GCGCGTCGCC AGGCGCTGGT GGCGCGCGCG GCCGAGGCGG GCGTGCCGAT CGTCGAAGAC GACCCGTACG GCGAGCTGTA CTACAGTGGG CAGCCGTTGC CGAGTCTGCT GTCGATGCAG CCTGACGGCG TCATCTACAT GGGGTCCTTT TCCAAGGTGC TCGCGCCCGG TTTGCGGCTG GGGTATGTGG TCGCGCCCGA AGCGGTGCTG GGCAAGCTGA TCCAGGCCAA GCAGGCGGCC GATCTGCACA CACCATCTTT CACGCAGCGC GTGGTGTACC AGACACTGCA GGACGATTTT CTCGACACCC ATATCCCGCA GATCCGCGCG TTGTATGCGC GCCAATGCAG CCTGATGCTG GAGGCGCTGG ATCGGCATTT TCCGGCGCAG GTGCAATGGA ACCGTCCGGA AGGCGGGATG TTCCTGTGGG TGACCTTGCC ACCGGGGTTG GATGGCACTG CATTGCTGGC GCGGGCTATC GCACGCAATG TTGCGTTCGT GCCGGGCGCG CCATTCTTCG CCACCTTGCC GCAGACCAAT ACGCTACGCC TGTCGTTTGT CACCGTGCCC GGCGAGAAGA TCGATGCCGG CATCCAGGTG TTGGGCGAGT TGCTGCGCGA GGCGCTGGAC GCGTTGGCGG GACAGGGCGC GTGA
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Protein sequence | MPSLHSAAAA GVRYACAMTT SFQISRRAQA LTSSAIREIL KVTERPEVIS FAGGLPSPAT FPVERMRAAS DQVLRDAPQA ALQYGPTEGF APLREWVAAR LSRDGASIRP SQVLITTGSQ QGLDLLGKLF IDEGSKVLVE TPSYLGALQA FSLFQPGFVG MPSDEDGVVV DALDPALLAD ARFLYCLPNF QNPTGRRLPL ARRQALVARA AEAGVPIVED DPYGELYYSG QPLPSLLSMQ PDGVIYMGSF SKVLAPGLRL GYVVAPEAVL GKLIQAKQAA DLHTPSFTQR VVYQTLQDDF LDTHIPQIRA LYARQCSLML EALDRHFPAQ VQWNRPEGGM FLWVTLPPGL DGTALLARAI ARNVAFVPGA PFFATLPQTN TLRLSFVTVP GEKIDAGIQV LGELLREALD ALAGQGA
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