| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00087 |
|---|
| Symbol | |
|---|
| ID | 6305268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1772089 |
|---|
| End bp | 1772532 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642639039 |
|---|
| Product | putative secreted protein |
|---|
| Protein accession | YP_001912912 |
|---|
| Protein GI | 188575983 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.217198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG GGCTGGCCTC GCTGCCGCGC ACACGCCATT GGCGGGTGTT TGCGTTGGCG
ATGCTGGCGC TGGCCGCGTA TCCGGCGTTC GTGTTGATTG CGGTGTATTC ACAGTGGTTG
GGTTCTGGCC TCCCCGGCGG GCGCAACGGC CCGGCCGATG CCTACCGACA CAGCCTTGCG
AGCGCCATCG TTGCCTACAC CCTGTCGCCG CGTTGCGTGG ATTGGGTGAC TGCCGTGATG
GAGCGCGGTG GTGTTGGCAC GCCGAGCCGC GCGATGGATG CGCACAACAA CGGGATCGGC
GCGCGCATCG GCGCAGCCGC TCCCAGCTGG GCCGCGATGC AGCGAGAGGT TCGCGCCGCG
GTCGACCATG GTGCGATCGA TGCCCGATCA CCCGACCAAA TTACCTGGCT CGCCGCAACG
GCGTGGCAGG ACCGACTTTA CTGA
|
|---|
| Protein sequence | MKTGLASLPR TRHWRVFALA MLALAAYPAF VLIAVYSQWL GSGLPGGRNG PADAYRHSLA
SAIVAYTLSP RCVDWVTAVM ERGGVGTPSR AMDAHNNGIG ARIGAAAPSW AAMQREVRAA
VDHGAIDARS PDQITWLAAT AWQDRLY
|
|---|
| |