Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0068 |
Symbol | traX-1 |
ID | 1187446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 57825 |
End bp | 58427 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637408327 |
Product | traX protein |
Protein accession | NP_808653 |
Protein GI | 29171607 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTG AACCTGACAC AACAAAGCAC GAGGACGAAC AATCGCCGCC GGACGACAAG CATTCGGGCA CACCGTTACG GCGCGCCGGT CATGTGGGGC TGTCGATCCT CAACCCGTTC TCTGACCTGG CGGTGATCTA TCGCCGGGGC ATAAAACCGA CGGCGCAAAA GCTGAAGCTA CTGAAGACGT TGCTGACCCC GGCGTCAGCA ACGACTGAGG CAGATGCAGT CGGTGTCAGC TGGGTACAAG CAGTCGAGCG TTCCAGCAGA TCTGTTGAGC AACTGGTGAG GTCCTACCAG CGCATTCGTG CTGCATGGTG GTGCTTGATG GCGAGTGGTG GGGCCTTGAG CCTGTTCCTG CTGATCATGC TGCTGTTGGC AAACCTCAGC TTGCCTTCGG GCACATTCCT GCGGGCTGCG GTGACACTGC TTTTATTGAT GGCTCTGGCC AGTTGGGGGT TTGCGCAGAC GCTAATCGCC ACTTACCGGC TATGGCAGTT GCGGGAACGG CGCGTCAGCG TAGCGGAACG AGGCACCTTT GAAGATTTCC TCATCGAAAA CCGATGGTGC CGGCAGGTAC TGACGCTCGG TCACTTCGGC TAA
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Protein sequence | MKTEPDTTKH EDEQSPPDDK HSGTPLRRAG HVGLSILNPF SDLAVIYRRG IKPTAQKLKL LKTLLTPASA TTEADAVGVS WVQAVERSSR SVEQLVRSYQ RIRAAWWCLM ASGGALSLFL LIMLLLANLS LPSGTFLRAA VTLLLLMALA SWGFAQTLIA TYRLWQLRER RVSVAERGTF EDFLIENRWC RQVLTLGHFG
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