Gene PSPTO_B0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0046 
Symbol 
ID1187424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand+ 
Start bp36937 
End bp37470 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content55% 
IMG OID637408306 
Producthypothetical protein 
Protein accessionNP_808632 
Protein GI29171586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.152714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT GGCGTGTTTT GATGCACAAT TCCTCCGTTT ACCAGTCACT TATCACGTCG 
ATCGAGCGAT TGGGTGTGGA GGTGTATTCC CCCGAAAGCA TTACCTACCG CAAACGTCCT 
GATCGCCCTT CATCGACAGA GAAGGTGGTG CGTTTGTTTC CTGGCTATCT GCTGCTGCGC 
TTCGATCCCC AAGTGACGCA CACCACCACC ATCACAGCGT TGAACGGCGC CCGTGGGTTT 
GTTCAGTTCG GCGGTCAAAC GTGTGAGTTC GGCGGTCAAG CGTGTGTCAT GCAGGACAGC 
ACAGTAGAGG GCTTGAAGGC AGCGGCTTTG GTTCGTTCCA ACCGTGCGCT TGATTGCATC 
GAGTTTCGTA ATTTGCCGAC AGAGCTGGAA AAAACGCTGC GTCTGATCAT CGACATGAAA 
TCTGAAGCTG CCCGTAGAGC GGCTTTCCTT GCGCTCCTGG CCCAGGACGC AGCGCTGGAG 
CGCCTTGTCA GGCGCCACGG AACCCTTTGC TATTCGAGGG TACGTGCCGC CTAG
 
Protein sequence
MKNWRVLMHN SSVYQSLITS IERLGVEVYS PESITYRKRP DRPSSTEKVV RLFPGYLLLR 
FDPQVTHTTT ITALNGARGF VQFGGQTCEF GGQACVMQDS TVEGLKAAAL VRSNRALDCI 
EFRNLPTELE KTLRLIIDMK SEAARRAAFL ALLAQDAALE RLVRRHGTLC YSRVRAA