Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0034 |
Symbol | |
ID | 1187412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | - |
Start bp | 27526 |
End bp | 27870 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637408296 |
Product | hypothetical protein |
Protein accession | NP_808622 |
Protein GI | 29171576 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.00051461 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA CAAGGCTGTA CACCCAGCAT GATCTGGCTG CGGCCCGTGA GTTTCTGGAC GGCCTCCCCT CGCTGAAGGT GGACAAGTTC CAGCGCTTTG GGCCTGAAGC GTCAGTCAGC GAAAAACTGT ACGCGGCCCT GCACGATGAA GACTTTACCC TCACGGATAT TTTGCACTTC CTGGAAAAGC ATGGATTCAG CTCGACGGTA GACAAACTGC GCACGATGCG TAGAGTGATG TTCACGCTTG ACATTGATCA GCCGGAATCC CGTGACCCAT CACGGTGTAT TGATATCAGC AGAATGCGGG TGCATACGTG GATAAAAAGA AAAAAATCAC GCTAG
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Protein sequence | MAKTRLYTQH DLAAAREFLD GLPSLKVDKF QRFGPEASVS EKLYAALHDE DFTLTDILHF LEKHGFSSTV DKLRTMRRVM FTLDIDQPES RDPSRCIDIS RMRVHTWIKR KKSR
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