Gene PSPTO_B0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0027 
Symbol 
ID1187405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand
Start bp24479 
End bp24895 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content58% 
IMG OID637408289 
Producthypothetical protein 
Protein accessionNP_808615 
Protein GI29171569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0000933152 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTCG ATCCTGACCT GCCTGGTCTT GCAACGAAGA TCACTCAGAA CTACAGCAAC 
GCCCAGATTG CCCAGTTGAT CAGAATGATC AGTCCTGTTT CACCCTGCGC CCTGATGGCT
GCGGACGAAT TTGAGCGGGT CATGGCCGTG CTTGCGGGCC AGAATCGACG TCGGGCGTTC
TCCGATCGCT CGATAAGTGC TGCCAGGCTC GTCCTGGTCA TGGGTGCCAG TGTGTCCGAA
GCCGCCTTGG AGACTGGATT GACCCGGCAG GTGGTTCACA GGCTTATGGC ACGCATTCGG
GCGCGCCTGG AGGATTTGCC GGCTGATTGG GTCAAGGTTG AGGCCTGGCT TCCGCCAGCA
GCTGCAGGTG ATGTTCTGGC ATTAGCTCAA TCACTCAGAT CTGCTCAATC GCAATAG
 
Protein sequence
MIVDPDLPGL ATKITQNYSN AQIAQLIRMI SPVSPCALMA ADEFERVMAV LAGQNRRRAF 
SDRSISAARL VLVMGASVSE AALETGLTRQ VVHRLMARIR ARLEDLPADW VKVEAWLPPA
AAGDVLALAQ SLRSAQSQ