Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0027 |
Symbol | |
ID | 1187405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 24479 |
End bp | 24895 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637408289 |
Product | hypothetical protein |
Protein accession | NP_808615 |
Protein GI | 29171569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0000933152 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTCG ATCCTGACCT GCCTGGTCTT GCAACGAAGA TCACTCAGAA CTACAGCAAC GCCCAGATTG CCCAGTTGAT CAGAATGATC AGTCCTGTTT CACCCTGCGC CCTGATGGCT GCGGACGAAT TTGAGCGGGT CATGGCCGTG CTTGCGGGCC AGAATCGACG TCGGGCGTTC TCCGATCGCT CGATAAGTGC TGCCAGGCTC GTCCTGGTCA TGGGTGCCAG TGTGTCCGAA GCCGCCTTGG AGACTGGATT GACCCGGCAG GTGGTTCACA GGCTTATGGC ACGCATTCGG GCGCGCCTGG AGGATTTGCC GGCTGATTGG GTCAAGGTTG AGGCCTGGCT TCCGCCAGCA GCTGCAGGTG ATGTTCTGGC ATTAGCTCAA TCACTCAGAT CTGCTCAATC GCAATAG
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Protein sequence | MIVDPDLPGL ATKITQNYSN AQIAQLIRMI SPVSPCALMA ADEFERVMAV LAGQNRRRAF SDRSISAARL VLVMGASVSE AALETGLTRQ VVHRLMARIR ARLEDLPADW VKVEAWLPPA AAGDVLALAQ SLRSAQSQ
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